| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0827 |
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| Symbol | |
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| ID | 5108921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 942501 |
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| End bp | 943670 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640502043 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_001186327 |
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| Protein GI | 146305862 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCC GCACGCTTCT GATTCTCGGC GCGCTCTGCG CCTTCGGCCC GCTGGCCATC
GATTTCTACC TGCCAAGTTT CCCCACCCTG GCGCAGCAGT TCGCCACCGA CGTCGAGCAT
GTGCAGCTGT CGCTGGCGGC CTACTTCGTC GGCATCGCCA TCGGTCAGCT GTTCTACGGC
CCGCTGGCGG ATCGCTACGG CCGGCGCGTG CCGCTGCTGG CGGGGGTGGC GCTGTTCACC
GTGGCCTCGC TGGCCTGCGC GCTGGCGCCG AGCCTGGAAT GGCTGATCGG GGCGCGCTTC
GTGCAGGCCC TGGGCGGCTG CGCCGGCATG GTCATTACCC GCGCAGTGGT GCGCGACCTG
TGCGATCCGC TGGCTTCGGC CAAGGTGTTC TCGCAACTGG TGCTGGTGAT GGGCCTGGCG
CCGATCCTCG CGCCGCTGGG CGGTGGTCTG CTGCTGAAAA CCCTGGGCTG GCCCTGGATC
TTCCACAGCC TGGCGATCTT CTCCGGCCTG TGCCTGCTGG CGGTGCTGCT GTGGCTGCCG
GAAACCCGTC CGCAGCATCT GCAGCCCGCG CCCCTGAGCG GCGCCTTCGG CCAGTACCGG
GCCCTGCTCG GCAATGCGCC GTTCATGGGT TACAGCCTGG CCGGTGGCGT GGCCATGGCC
GGGATGTTCG CCTACATCGC CGGCTCGCCT TTCGTCTTCA TCGAGCTGTA CGGCGTGCCG
GCCGAGCATT ACGGCTGGTT GTTCGGCAGC AACGCGGCGG GTTTCGTGCT CATGGCGCAG
GTCAATGCGC GTCTGGTGCT GCGCGGCGGC CCGGCGCTGT GGCTGCGGCG CATGGTGCTG
GTGTATCTGG CCAGCGGCCT GTGCCTGCTG GCGCTGGCGT TGTGGCAGCC GGCGCAGCTG
TGGCCGCTGC TGATTCCATT GTTCGTCTGC GTGGCCAGCC TGGGTTGCGT GCTGCCCAAT
GCCACGGCGT GTGCCATGGC CGGTCAGGGC CGGCATGCCG GCAGCGCATC GGGTCTGCTG
GGCAGCATGC AGTTCAGCGT GGCGGCCAGC GCCTCGGCGC TGGTGGCCTT CCTGCATGAT
GGCTCGGCCA TGCCGATGGC CCTGGTGATC GCCCTGTGTG GCGGCGTCGC CTGTGCTTTC
GCCTGCTGGA GCAAGCGCTT CGTGGTCTGA
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| Protein sequence | MNLRTLLILG ALCAFGPLAI DFYLPSFPTL AQQFATDVEH VQLSLAAYFV GIAIGQLFYG
PLADRYGRRV PLLAGVALFT VASLACALAP SLEWLIGARF VQALGGCAGM VITRAVVRDL
CDPLASAKVF SQLVLVMGLA PILAPLGGGL LLKTLGWPWI FHSLAIFSGL CLLAVLLWLP
ETRPQHLQPA PLSGAFGQYR ALLGNAPFMG YSLAGGVAMA GMFAYIAGSP FVFIELYGVP
AEHYGWLFGS NAAGFVLMAQ VNARLVLRGG PALWLRRMVL VYLASGLCLL ALALWQPAQL
WPLLIPLFVC VASLGCVLPN ATACAMAGQG RHAGSASGLL GSMQFSVAAS ASALVAFLHD
GSAMPMALVI ALCGGVACAF ACWSKRFVV
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