| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0825 |
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| Symbol | |
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| ID | 5108919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 938114 |
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| End bp | 939265 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502041 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001186325 |
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| Protein GI | 146305860 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTCG TTCGTCTGCT GCGTTGCTGC CTGCCCTTCA ATCTAGCTCT GTTGTCGTCG
GTTGCACTGG CTGCCGATGC GCCGCCAGCC GCGGTGACGG TGGAGCGCGT GGTGGCTGGC
GAATTGCCGA TCGTGCTGGA GTACCCGGCC CGTACCACGG GCTATCGCGA GGTGCAGGTC
CGCGCGCAGG TCGGCGGCAT CCTGCAGGAA CGCACCTATC AGGAAGGCAG CCGGGTGCAG
AAGGATCAGG TGCTGTTTCG CATCGACCCG CGCCCCTACG AGGCCGCCCT GGCTCGTGCC
AAGGGCGCGC TGGCGCAGGA ACAGGCGCGT TTCCGGCAGA CCGACCGCGA CCTCAAGCGC
ATCCGTGAAC TGCAGAAGAA GGGCTTCGCC AGCGAGAGCG AGCTGGACAA TGCGGTGTCC
AACTTCGAGC AGAGCAAGGC CAATATCGAG GCGGCCCAGG CCGAGGTGCA GTCGCGCCAG
ATCGACCTCG ACTACACCAC GGTGAAGGCG CCGATTACCG GCATCACCAG CAAGGAGAGC
GTCTCCGAAG GCAGCCTGAT CGTCGCTGGC GACCCCAGTG CCAGCCTGCT TACGCAGATC
ACCCAGCTCG ACCCGATCTT CGTCAATTTC GCCTATCCGG ATGCCGAGGC CGAACGCCTG
CGGCGCGAGC TGTCCGAGGG CAGCCTGGTG CCGCCGGCCA GCGGCAAGCT CAGTGTGGAG
GTGCACTTCG GCGACGGTTC GGCCTATCCG GTGCCCGGCG AGGTGGACTT CACCGACAGC
CTGATCGATC GCGGTACGGG CACCGTCAGT GCCCGCGGCG TGGTGCCCAA CCCCGATCAG
AAGCTGCTGC CGGGGCAGTT CGTGCGCGTC AAGGTCAAGG GGCTGACGCG CCCGCAGGCC
ATCACCGTGC CCGAGCGGGC CGTGGCTCAG GGGCCGCGCG GCACCTTCGT CTACGTCGTC
GACGATCAGG GCATCGCGCG CATGCGCCAG GTCGCCACGG GCGATACATC GGGCGGGCGC
TGGCTGCTTC TGTCCGGGGT CAGCGATGGT GAGCGGGTGA TTGTCGATGG CCTGGCCAAG
GTGCGTCCGG ACAGCCCGGT GCAGGTCGAG GAGGCGAAGG CGGCCACGGC CCAGACCCCG
GCTCAGGAGT AA
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| Protein sequence | MPLVRLLRCC LPFNLALLSS VALAADAPPA AVTVERVVAG ELPIVLEYPA RTTGYREVQV
RAQVGGILQE RTYQEGSRVQ KDQVLFRIDP RPYEAALARA KGALAQEQAR FRQTDRDLKR
IRELQKKGFA SESELDNAVS NFEQSKANIE AAQAEVQSRQ IDLDYTTVKA PITGITSKES
VSEGSLIVAG DPSASLLTQI TQLDPIFVNF AYPDAEAERL RRELSEGSLV PPASGKLSVE
VHFGDGSAYP VPGEVDFTDS LIDRGTGTVS ARGVVPNPDQ KLLPGQFVRV KVKGLTRPQA
ITVPERAVAQ GPRGTFVYVV DDQGIARMRQ VATGDTSGGR WLLLSGVSDG ERVIVDGLAK
VRPDSPVQVE EAKAATAQTP AQE
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