| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0821 |
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| Symbol | |
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| ID | 5108915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 934143 |
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| End bp | 936515 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640502037 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001186321 |
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| Protein GI | 146305856 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCT TCGACCTGCC GATCCAGGGC ATGACCTGCG CCAGTTGCGC CGGACGTGTC
GAACGCGCAC TGCGCAAGCT GCCACAGGTG ACCAGCGCCA GCGTCAACCT GGCCAGCGAG
CAGGCACGCG TCGAAGCGCC GGGCGCCAGC CTGACGCAGC TGATCGCCGC CATCGAGGAC
GCAGGCTACG CCGTGCCCAG CCAGCCGCTG GAACTGGGCA TCGAGGGCAT GACCTGCGCC
AGCTGCGTCG GCCGTATCGA ACGCGCCCTG CACAAGGTGC CCGGCATCCG CCAGGTGGCA
GTCAACCTGG CGGACGAGAA AGCTCACCTG CAGGTGTTCG CCGGTTTCGA TCCGCAGCAG
GCCGTGAAGG CCGTGGTCGA TGCCGGCTAC AAAGCCACCC TGCCCGACGC TCGCCCGAGC
ACCGACGACG CACTCCGTCG CCTGCGCCGC GAGCGCCTGA CGCTGCTGGC GGCCATTGCC
CTGACCCTGC CGCTGGTGCT GCCGATGCTG GTGGAGCCCT TCGGCCTGCA CTGGATGCTG
CCGGCCTGGC TGCAGTTCCT GCTCGCCACG CCGGTGCAGT TCATCTTCGG CGCACGCTTC
TATCGCGCCG CCTGGCAGGC GCTCAAGGCG CGTGCCGGCA ACATGGATCA ACTGGTGGCC
ATCGGCACCA GCGCCGGCTA CGGCCTGAGC CTGTATCAAT GGGCCGTGAC GCCGCCTGGC
GGCATGCCGC ACCTGTATTT CGAGGCCTCG GCGGTGATCA TCAGCCTGAT CCTGCTCGGC
AAGTACCTGG AAAGCCGCGC CAAACGCCAG ACCGCCAGCG CCATCCGCGC CCTGCAGGCG
CTGCGCCCAG ATCGCGCCGT GCGCCTGATC GACGGCCGCG AGGAGAACGT GGCCATCGAA
GCCCTGGCGC TCGGCGACCA GGTGCTGGTC AAACCGGGCG AACGCTTTCC GGTGGACGGG
CGCGTGACGG AGGGCCACAG CCACGCCGAC GAGGCACTGA TCAGCGGCGA AAGCCTGCCG
GTGGCCAAGC AGCCGGGCGA CAAGGTCACC GCCGGCGCCA TCAACGGTGA AGGCCGCCTG
CTGGTGGAAA CCACCGCCCT GGGCGCGGAA ACCGTGCTGG CACGCATCAT CCGCCTGGTG
GAAGACGCCC AGGCGGCCAA GGCGCCGATC CAGAAGCTGG TGGACAAGGT CAGCCAGGTC
TTCGTCCCGG CGGTGCTGCT GGTCGCCCTG GCCACCTTGC TCGGCTGGCT GGCATTCGGC
GCACCGCTGG AAAACGCCCT GCTCAACGCC GTGGCGGTGC TGGTTATCGC CTGCCCCTGC
GCGCTGGGCC TGGCCACACC GACCGCGATC ATGGCCGGCA CCGGCGTCGC CGCGCGCCAC
GGCATCCTGA TCAAGGACGC CGAAGCGCTG GAAGTGGCCC ACGCCGTCGA CACCATCGCC
TTCGACAAGA CCGGCACCCT CACCGAAGGC AAGCCGCGCA TCGTCCATAT CGGCCTGGCC
GAGGCCAGCG AGGACGAACT GCTGCGCCTG GCCGGCGGCC TGCAGCAGGG CAGCGAGCAT
CCCCTGGCCA AGGCCGTGCT GCAACGCTGC GCCGAACGAC AGATCGCCCT GCCCGCGCTC
AGCGACAGCC GCGCCCTGCC CGGCCGCGGT ATCGCCGGTA CGGTGAGTGG CCGTGCGCTG
CAGTTGGGCA GCCATCGCCT GCTCGACGAG CTGCACCTGC CAAGCGGCCC GCTGGCCGAA
TCCGCCCGCT CATGGGAGGC CGAAGGCCGC ACCCTGTCCT GGCTGATCGA AACCGGCAAG
ACGCCGCGTC TGCTGGGCCT GCTGGCCTTC GGTGACACGC TCAAGGAAGG CGCCGTGCAA
GCCATCGCCA AGTTGCGCGA ACAGGGCATC GGCAGCCACC TGATCAGCGG GGACAACCCG
GGCAGCGTCG CCGCGGTGGC TGACGCACTG GGCATCGATC AGCCCCACGC CCAGGTGCTG
CCGGCGGACA AGGCGCGCCT GATCGGCGAA CTGCGCCAGC ACGGCACCGT GGCCATGGTC
GGCGACGGCA TCAACGACGC CCCCGCACTG GCCGCCGCGG ATGTCGGCAT CGCCATGGGC
GGTGGCACCG ATGCCGCCAT GCACGCGGCC GGCATCACCC TGATGCGCGG CGACCCGCGC
CTGGTGCCCG CCGCGCTGGA AATCAGCCGA CGCACCTACG CCAAGATCCG CCAGAACCTG
TTCTGGGCCT TCATCTATAA CCTGGTCGGC ATTCCCCTGG CCGCAGCCGG CCTGCTCAAC
CCCATGTTCG CCGGCGCCGC CATGGCGCTG TCCAGCGTCA GCGTGGTGAG CAACGCCCTG
CTGCTGACCC GCTGGAAACC GCAAGACCTC TAG
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| Protein sequence | MTTFDLPIQG MTCASCAGRV ERALRKLPQV TSASVNLASE QARVEAPGAS LTQLIAAIED
AGYAVPSQPL ELGIEGMTCA SCVGRIERAL HKVPGIRQVA VNLADEKAHL QVFAGFDPQQ
AVKAVVDAGY KATLPDARPS TDDALRRLRR ERLTLLAAIA LTLPLVLPML VEPFGLHWML
PAWLQFLLAT PVQFIFGARF YRAAWQALKA RAGNMDQLVA IGTSAGYGLS LYQWAVTPPG
GMPHLYFEAS AVIISLILLG KYLESRAKRQ TASAIRALQA LRPDRAVRLI DGREENVAIE
ALALGDQVLV KPGERFPVDG RVTEGHSHAD EALISGESLP VAKQPGDKVT AGAINGEGRL
LVETTALGAE TVLARIIRLV EDAQAAKAPI QKLVDKVSQV FVPAVLLVAL ATLLGWLAFG
APLENALLNA VAVLVIACPC ALGLATPTAI MAGTGVAARH GILIKDAEAL EVAHAVDTIA
FDKTGTLTEG KPRIVHIGLA EASEDELLRL AGGLQQGSEH PLAKAVLQRC AERQIALPAL
SDSRALPGRG IAGTVSGRAL QLGSHRLLDE LHLPSGPLAE SARSWEAEGR TLSWLIETGK
TPRLLGLLAF GDTLKEGAVQ AIAKLREQGI GSHLISGDNP GSVAAVADAL GIDQPHAQVL
PADKARLIGE LRQHGTVAMV GDGINDAPAL AAADVGIAMG GGTDAAMHAA GITLMRGDPR
LVPAALEISR RTYAKIRQNL FWAFIYNLVG IPLAAAGLLN PMFAGAAMAL SSVSVVSNAL
LLTRWKPQDL
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