| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0816 |
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| Symbol | |
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| ID | 5108910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 927359 |
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| End bp | 929539 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640502032 |
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| Product | lipase, class 3 |
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| Protein accession | YP_001186316 |
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| Protein GI | 146305851 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.229275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATT CCCCTCATAC GGACATGACC GAAACTCTGA CCTGCCCTTT ACGAGGACAC
TGGGTCAGTG TTCGCTTGGT AGATGAGCAT GGAAATGGAA AAATCTATGC AGGCTTGAAC
TATGTGTTGT ACGACAGTCA GGGCCAGAAA TATCAAGGCT CCCTTGATGA GGACGGTTTT
TCTAGGATTG ATGGCATCTA CTGTGGCCCG ACCGTACTGT CTTTTGCAGA CGAGTATCTT
GGGCAAGATT CATGGTACGT AGGGCTGATT CGACGTGAGA AGTTCGCTCT TCCACTCGTA
GCCCTCCAAG TGGCTGCCGA ACAGTCCCCT TGCGGCCCCC GAAAGCCGGA TGGCAAGACT
TATCTGGCAG AAGAGCGCGC CTTATCGGAG AACGCCCGCT TCTTGCGTGT AGAAGTGAGG
GATCTCGTCG AGGCTACAGC CCACCTGCCG GATAGAGATA CGGCTTGGTG GCCACGGCCT
TCCGCCGTGC TCAAACGCAA TGCCGGGTTG GCTGCCGAGC GCACGGGAGT GGCTTTGACG
CCCAACTTGC ACCATGTGCT GGAAGTCAAG GCGCTACGTG CTTACAGCCC GATCCTCTCG
CGCGACAAGG CCTTCTGCGC CCTGAATGCC TATCACCTAG CGGTGATGAG CACTTTTGTC
TATGCCCCCT TCGGCGAGCC GAAACGAGAG GATGCGGATT ATACTTCCAG CCCGCCACCC
TATCCCCGAG CCGGCAGCAT TGGTCATGTG CTGCGTGAGC AACTGGCCAG CTTGAACAAG
GCCAATGCCT TCAACAGTGC GCGCTACCAT CTGCTGTACG AAGAGGTGGC TTATTCCAAG
CGCCTTGAAA TCATGCCCTA CGACCCGGAG CGTTATCAGG CCGAGGCCGC TGGAGAGTGG
AGCAATCCAG AAGACGTACA CTTCCTTTAT GACACAGGGA CTGATACGGA TACGGATACG
GACACCCAGG CCTTTATCAC CCACAGCGAC AAGGTGGTGC TGATTTCGGT TCGCGGAACT
CAGGAAACAC CAGATATCTT GCGGGATATG GATGCTCGTC AGGTTCCGTA CGAAGAGGGG
ATCGGTCAGG CTCACCGTGG TTTCTATCGC GCGTTCAAAG CTGCAAAAGT ATTTACCCAG
CGTTATATGG ATGCCTTCTA TACCGGCGAA CAGACGGTGA TCGTCTGTGG CCATAGTCTC
GGTGGAGCGA TAGCACTGCT ACTGGCGGAG TGGTTGCGAC GCCTTCCGAC CGCTCCTGAT
GTGGTTCTTT ATACATACGG CGCCCCTCGC GCAGGGGATC GCGCCTTCGT GCAAGGTGCC
CAGGCACTTG TCCATCACCG CCTCGTCAAT CACAACGACC CTGTGCCTGC CGTGCCTTTT
ACCTGGATGG ATGCCGAGTG GAAGCTCGCT ACCGCCGGCA CTGTCACCTT ATTCAGCTCG
CCCGTGCTGG GTATCGTATT GTTATTGGGC GGCTTGCTCA ATTTGAAGGG TGATCCTTAC
GAGCATCATG GCGAGCAGCG TCACTTCGTG CCACGCAAAG CCAATGGTGG TAGCGAAGCC
TCCATACTCT GGCAACCTAA TTGCGCGTTG ATCGATGAGC AGGCATGCGC ACGTTATGCC
GGAGCGATCG ACCTGCAGGG TGACATGCCC AAACGGATGT CTTTTATCGA GCAGGCGTTC
TCCGCCGCGG AGCACTCCAG TGATGGTGGC TATAGCCGGG CCATGTTGAC AACCCTGTTG
CGCTGGAACG CCAGCGTCGA GGAAAGAGAC GGTGCGCTGT TCAACGCAGG AGAAATCCGC
GATATCCATA ACCTGATAGA GCAGGCCGAA GCACAACTGG CCAGTTGGCG GCCGCGCAGT
TTCATGGAAT TCCGACGAGC TGTCAGGGCT CACCATGACA CACGCTTCTA CAACAAGTCT
GACCTGGAGT TGAGGCGAAT GTACGTCGAA GGGATAACCT TGGCTCGCTC ACTCAGCAGA
CAGCAGAAAG AGGCATTAGC TCGTGCGAAA CAGCGGCTTT TGAATGAATC GGAGCGACGA
CTGACTGTAC GGGATGTATT TGGCGACCAG ACCGAGCGAG AGGATCTTTC CGAGTTGGTG
GCTCAGTGGC GTGCAATTGG GGAAAACCAG AAAGCAGAAA AATTGGCAGG CATAGCGCTG
TCTAATCCTC ATTACGCTTG A
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| Protein sequence | MSDSPHTDMT ETLTCPLRGH WVSVRLVDEH GNGKIYAGLN YVLYDSQGQK YQGSLDEDGF
SRIDGIYCGP TVLSFADEYL GQDSWYVGLI RREKFALPLV ALQVAAEQSP CGPRKPDGKT
YLAEERALSE NARFLRVEVR DLVEATAHLP DRDTAWWPRP SAVLKRNAGL AAERTGVALT
PNLHHVLEVK ALRAYSPILS RDKAFCALNA YHLAVMSTFV YAPFGEPKRE DADYTSSPPP
YPRAGSIGHV LREQLASLNK ANAFNSARYH LLYEEVAYSK RLEIMPYDPE RYQAEAAGEW
SNPEDVHFLY DTGTDTDTDT DTQAFITHSD KVVLISVRGT QETPDILRDM DARQVPYEEG
IGQAHRGFYR AFKAAKVFTQ RYMDAFYTGE QTVIVCGHSL GGAIALLLAE WLRRLPTAPD
VVLYTYGAPR AGDRAFVQGA QALVHHRLVN HNDPVPAVPF TWMDAEWKLA TAGTVTLFSS
PVLGIVLLLG GLLNLKGDPY EHHGEQRHFV PRKANGGSEA SILWQPNCAL IDEQACARYA
GAIDLQGDMP KRMSFIEQAF SAAEHSSDGG YSRAMLTTLL RWNASVEERD GALFNAGEIR
DIHNLIEQAE AQLASWRPRS FMEFRRAVRA HHDTRFYNKS DLELRRMYVE GITLARSLSR
QQKEALARAK QRLLNESERR LTVRDVFGDQ TEREDLSELV AQWRAIGENQ KAEKLAGIAL
SNPHYA
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