Gene Pmen_0803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0803 
Symbol 
ID5108897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp914148 
End bp914816 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content65% 
IMG OID640502019 
Productputative hydroxylase 
Protein accessionYP_001186303 
Protein GI146305838 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGA GCATTCCCGA CGTGCTGAAT GCCGAACAAC TGCAGCAGTG CCGCGCCGCG 
CTCGAGGGCG GCAACTGGCA GGACGGTCGG CTCACCGCCG GGCATCAGGC GGTGAACGTC
AAGGCCAATC AGCAGCTCGC TCAGGATGAC CCGCTGACGC AGCAACTGGG CGATTTCATC
CTGGCCTGCC TGGCCCAGCA TCCGCGTTTC ATGGCCGCCG CGCTGCCGCT GAAGGTGGTG
CCGCCGCGCT TCAATCGCTA TGCCGAGGGC GGCACCTATG GTGACCATAT CGACAACGCC
GTGTTCAGCG TGCCGGGTAC GCCGCATCGG ATTCGCGCCG ACCTCTCGGC CACCCTGTTC
TTCAGCGAGC CGGAGGAGTA CGAAGGCGGC GAGCTGGTGG TGCAGGACAA ACGCATCAAG
CTGCCGGCCG GCCATCTGAT TCTCTATTCC AGCGGCAGTC TGCATCGGGT CGAGCCGGTG
ACTCGCGGCG CGCGTCTGGC TTCGTTCTTC TGGGTGCAGA GCCTGGTGCG TCAGGACGAG
CAGCGCAGCG TGCTGCTGGA GCTGGACGAC AGCATCCAGG CGCTGCGTCA GCAGGTGCCG
GACAGCCCCG AACTGGTTCG GCTGACCGGG ATCTACCACA ACCTGTTGCG GCAATGGACG
CAGACCTGA
 
Protein sequence
MMLSIPDVLN AEQLQQCRAA LEGGNWQDGR LTAGHQAVNV KANQQLAQDD PLTQQLGDFI 
LACLAQHPRF MAAALPLKVV PPRFNRYAEG GTYGDHIDNA VFSVPGTPHR IRADLSATLF
FSEPEEYEGG ELVVQDKRIK LPAGHLILYS SGSLHRVEPV TRGARLASFF WVQSLVRQDE
QRSVLLELDD SIQALRQQVP DSPELVRLTG IYHNLLRQWT QT