| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0792 |
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| Symbol | prfC |
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| ID | 5108886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 898169 |
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| End bp | 899752 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502008 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001186292 |
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| Protein GI | 146305827 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.735214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC AGGCCGCCGA AGTCGCCAAG CGCCGTACCT TCGCCATCAT CTCCCACCCG
GACGCCGGTA AGACCACCAT CACCGAGAAG CTGCTGCTGA TGGGCAAGGC CATCGAAGTG
GCCGGCACCG TGAAGTCGCG CAAATCCGAC CGTCATGCCA CCTCCGACTG GATGGAGATG
GAGAAACAGC GCGGCATCTC CATCACCACC TCGGTGATGC AGTTCCCCTA CCGCGAGCAC
ATCGTCAATC TGCTCGACAC CCCCGGCCAC GAGGACTTCT CCGAAGACAC CTACCGCACC
CTGACCGCCG TGGACAGTGC GCTGATGGTG CTCGACGGCG GTAAGGGCGT CGAGCCGCGC
ACCATCGCCC TGATGGACGT GTGCCGCCTG CGCGACACGC CCATCGTCAG CTTCATCAAC
AAGCTCGACC GCGACATCCG CGACCCCATC GAACTGCTCG ACGAGATCGA GGCGGTGCTG
AAGATCAAGG CCGCGCCGAT CACCTGGCCG ATCGGCTGCT ACAAGGACTT CAAGGGCGTC
TACCACCTGA GCGGCGACTA CATCGTGGTC TACACCCCGG GCCACGGTCA CGAGCGCACC
GAAGCCAAGA TCATCCAGAA GCTGGATTCC GACGAAGCCC GCGACCACCT CGGTGACATG
TACGAGCGCT TCGTCGAGGA GCTGGAGCTG GTGCAGGGTG CCTGCCATGA ATTCGAGCCC
GAAGCCTTCC TCAAGGGCGA AATGACCCCG GTGTTCTTCG GCACCGCGCT GGGCAACTTC
GGTGTCGATC ATGTGCTCGA CGCCGTGGTC GACTGGGCGC CGCGCCCACT GCCACGCGCA
GCCAACGAGC GCACCGTGGA GCCGACCGAG GAGAAGTTCT CTGGCTTCGT GTTCAAGATC
CAGGCGAACA TGGACCCGAA GCACCGCGAC CGCATCGCCT TCATGCGCAT CTGCTCGGGC
AAGTACACCC AGGGTATGAA GATGCGCCAC GCGCGCCTGG GCAAGGACGT GCGCGTCGGC
GACGCCCTGA CCTTCTTCTC CAGCGAGCGT GAACACCTGG AAGAAGCCTA CGCCGGCGAC
ATCATCGGCC TGCACAACCA CGGCACCATC CAGATCGGCG ATACCTTCAC CGAAGGCGAG
AACCTGGGCT TCACCGGCAT CCCGCACTTC GCCCCGGAAC TGTTCCGCCG CGTGCGCCTG
AAGGATCCGC TGAAATCCAA GCAACTGCGC CAGGGCCTGC AGGAGCTGGC CGAGGAAGGC
GCCACCCAGG TGTTCTTCCC CGAGCGCAAC AACGACATCG TGCTCGGCGC CGTCGGTGTG
CTGCAGTTCG ACGTGGTCGC CAGCCGCCTC AAGGAGGAAT ACAAGGTGGA GTGCGCCTAC
GAGGCGATCA ACGTCTGGTC GGCGCGCTGG ATCGAGTGCA GCGACGAGAA GAAGCTCAAG
GAATTCAAGG ACAAGGCCTA CGAGAACCTC GCCGTGGACG GCGGCGGCCA CCTCACCTAC
CTGGCCCCGA CCCGCGTCAA CCTCAGCCTG ATGGAAGAGC GCTGGCCGGA GATCAAGTTC
CGCGCGACTC GTGAGCACCA CTGA
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| Protein sequence | MTTQAAEVAK RRTFAIISHP DAGKTTITEK LLLMGKAIEV AGTVKSRKSD RHATSDWMEM
EKQRGISITT SVMQFPYREH IVNLLDTPGH EDFSEDTYRT LTAVDSALMV LDGGKGVEPR
TIALMDVCRL RDTPIVSFIN KLDRDIRDPI ELLDEIEAVL KIKAAPITWP IGCYKDFKGV
YHLSGDYIVV YTPGHGHERT EAKIIQKLDS DEARDHLGDM YERFVEELEL VQGACHEFEP
EAFLKGEMTP VFFGTALGNF GVDHVLDAVV DWAPRPLPRA ANERTVEPTE EKFSGFVFKI
QANMDPKHRD RIAFMRICSG KYTQGMKMRH ARLGKDVRVG DALTFFSSER EHLEEAYAGD
IIGLHNHGTI QIGDTFTEGE NLGFTGIPHF APELFRRVRL KDPLKSKQLR QGLQELAEEG
ATQVFFPERN NDIVLGAVGV LQFDVVASRL KEEYKVECAY EAINVWSARW IECSDEKKLK
EFKDKAYENL AVDGGGHLTY LAPTRVNLSL MEERWPEIKF RATREHH
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