| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0790 |
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| Symbol | |
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| ID | 5108884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 894837 |
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| End bp | 895544 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502006 |
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| Product | silent information regulator protein Sir2 |
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| Protein accession | YP_001186290 |
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| Protein GI | 146305825 |
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| COG category | [K] Transcription |
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| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.706815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCATC CGAACATCGT CATCCTCACC GGTGCAGGGA TTTCCGCCGA GAGCGGCATC
CGCACCTTCC GCGCATCCGA CGGCCTGTGG GAAGACCACC GCATCGAAGA GGTGGCCACG
CCTGAAGGCT TCGCCCGCGA CCCGGCGCTG GTGCAGCGCT TCTACGACAT GCGCCGCGCC
CAGTTGCGCG ATCCGGCCAT CGCACCGAAT GCCGGGCATC TGGCCCTGGC CGAGCTGGAG
GCCGGCTGGC GAGGTGACTT CCTGCTGGTC ACGCAGAACG TCGACAACCT GCACGAGCGC
GCCGGCTCCA GGAACCTGCT GCACATGCAT GGCGAGCTGC AGTCGATGCT GTGCAGCAAC
AGCCAGCAGC GCTTCCCGCT ACTGGAGGAC ATGCCGGTCG GCCAGGCGTG CGCCTGCTGC
GGCCTGGTCG GCACCTTGCG TCCGGATATC GTCTGGTTCG GCGAGATGCC CTATCACATG
GAGCGCATCT ATGACGCCCT GGAGCAGTGC GAGCTGTTCG TCAGCATCGG CACCTCGGGG
CACGTCTACC CGGCGGCGGG TTTCGTCGAG CAGGCGCGCC GGGCCGGTGC GCATACCCTG
GAGATCAATC TGGAACCGAG CCAGGGCCAT TCGCTGTTCG CCGAGAAACG CTATGGGCCG
GCTACCGAGC AGCTGCCGCG CTGGGTGGCG GAACTGTTGG CGGGTTGA
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| Protein sequence | MSHPNIVILT GAGISAESGI RTFRASDGLW EDHRIEEVAT PEGFARDPAL VQRFYDMRRA
QLRDPAIAPN AGHLALAELE AGWRGDFLLV TQNVDNLHER AGSRNLLHMH GELQSMLCSN
SQQRFPLLED MPVGQACACC GLVGTLRPDI VWFGEMPYHM ERIYDALEQC ELFVSIGTSG
HVYPAAGFVE QARRAGAHTL EINLEPSQGH SLFAEKRYGP ATEQLPRWVA ELLAG
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