Gene Pmen_0787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0787 
Symbol 
ID5108881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp889643 
End bp890563 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content69% 
IMG OID640502003 
Product1-phosphofructokinase 
Protein accessionYP_001186287 
Protein GI146305822 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1105] Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 
TIGRFAM ID[TIGR03168] hexose kinase, 1-phosphofructokinase family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.347436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA TTCTGACCCT CACCCTGAAC CCGGCGCTGG ATCTGACCCT GAGCCTCGAG 
CGCCTGCAGG CCGGGACGAT CAACCGCTGC CATGAACTGC GCAGCCACGC CGCCGGCAAG
GGCCTGAACG TGGCTCAGGT GCTCGCCGAC CTCGGCCACA ACCTGAGCGT GGCCGGCTTT
CTCGGCCGCG CCAACGCCAC ACCGTTCGAC AGCCTGATGC ACAAGCGCGG CTTTCACGAC
CTGTTCGTCC GGGTGCCGGG CGAGACGCGC AGCAATATCA AGCTGGCCGA AAGCGATGGG
CGCATCACCG ACCTCAACGG TCCCGGCCCG CAGGTCGAGG CCGAGCACCT GGAGCGTCTG
CAGGACGAAC TGCAGCCGCT GTTGGCCGGG CATGACGCCG TGGTGGTGGC CGGCAGCCTG
CCGCGTGGGG TGACGCCGCA ATGGTTCGCC GGCCTGCTGC GGCAGATCAA GGCCAGTGGC
GTGCCGCTGG CGGTCGATAG CAGTGGCGAG GCCCTGCGTG CGGCGCTGGG CGTCGCGCCC
TGGCTGATCA AACCCAACGA GGAAGAACTG GCCGAGGTCT GCGGCAGCGA TCTGTCCGCC
GCCGTGCAGA GCCTGCGTGC ACAGGGCATC GAGCATGTGC TGCTGTCGCG CGGCGCGGCC
GGTGTCGATT GGCATGGCCC GGACATCGCC CTGCGTGCGG TGCCGCCGCG GGTCGAGGTC
GCCAGCACGG TCGGTGCCGG CGACTCGCTG CTGGCGGCCA GCCTGCATGG CCTGCTCGAA
GGCTGGCCCG CCGAACGCAC CTTACGTCTG GCCACCGCGG TGGCCGCGCA GGCGGTCACC
CAGATCGGTT TCGGCATCCA CGATCGCGAG CAGCTGGCCC GTCTCGAGGC GGCCGTACAA
CTGCACCCCA TAGAAGAATA A
 
Protein sequence
MARILTLTLN PALDLTLSLE RLQAGTINRC HELRSHAAGK GLNVAQVLAD LGHNLSVAGF 
LGRANATPFD SLMHKRGFHD LFVRVPGETR SNIKLAESDG RITDLNGPGP QVEAEHLERL
QDELQPLLAG HDAVVVAGSL PRGVTPQWFA GLLRQIKASG VPLAVDSSGE ALRAALGVAP
WLIKPNEEEL AEVCGSDLSA AVQSLRAQGI EHVLLSRGAA GVDWHGPDIA LRAVPPRVEV
ASTVGAGDSL LAASLHGLLE GWPAERTLRL ATAVAAQAVT QIGFGIHDRE QLARLEAAVQ
LHPIEE