Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0787 |
Symbol | |
ID | 5108881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 889643 |
End bp | 890563 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640502003 |
Product | 1-phosphofructokinase |
Protein accession | YP_001186287 |
Protein GI | 146305822 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1105] Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) |
TIGRFAM ID | [TIGR03168] hexose kinase, 1-phosphofructokinase family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.347436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCA TTCTGACCCT CACCCTGAAC CCGGCGCTGG ATCTGACCCT GAGCCTCGAG CGCCTGCAGG CCGGGACGAT CAACCGCTGC CATGAACTGC GCAGCCACGC CGCCGGCAAG GGCCTGAACG TGGCTCAGGT GCTCGCCGAC CTCGGCCACA ACCTGAGCGT GGCCGGCTTT CTCGGCCGCG CCAACGCCAC ACCGTTCGAC AGCCTGATGC ACAAGCGCGG CTTTCACGAC CTGTTCGTCC GGGTGCCGGG CGAGACGCGC AGCAATATCA AGCTGGCCGA AAGCGATGGG CGCATCACCG ACCTCAACGG TCCCGGCCCG CAGGTCGAGG CCGAGCACCT GGAGCGTCTG CAGGACGAAC TGCAGCCGCT GTTGGCCGGG CATGACGCCG TGGTGGTGGC CGGCAGCCTG CCGCGTGGGG TGACGCCGCA ATGGTTCGCC GGCCTGCTGC GGCAGATCAA GGCCAGTGGC GTGCCGCTGG CGGTCGATAG CAGTGGCGAG GCCCTGCGTG CGGCGCTGGG CGTCGCGCCC TGGCTGATCA AACCCAACGA GGAAGAACTG GCCGAGGTCT GCGGCAGCGA TCTGTCCGCC GCCGTGCAGA GCCTGCGTGC ACAGGGCATC GAGCATGTGC TGCTGTCGCG CGGCGCGGCC GGTGTCGATT GGCATGGCCC GGACATCGCC CTGCGTGCGG TGCCGCCGCG GGTCGAGGTC GCCAGCACGG TCGGTGCCGG CGACTCGCTG CTGGCGGCCA GCCTGCATGG CCTGCTCGAA GGCTGGCCCG CCGAACGCAC CTTACGTCTG GCCACCGCGG TGGCCGCGCA GGCGGTCACC CAGATCGGTT TCGGCATCCA CGATCGCGAG CAGCTGGCCC GTCTCGAGGC GGCCGTACAA CTGCACCCCA TAGAAGAATA A
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Protein sequence | MARILTLTLN PALDLTLSLE RLQAGTINRC HELRSHAAGK GLNVAQVLAD LGHNLSVAGF LGRANATPFD SLMHKRGFHD LFVRVPGETR SNIKLAESDG RITDLNGPGP QVEAEHLERL QDELQPLLAG HDAVVVAGSL PRGVTPQWFA GLLRQIKASG VPLAVDSSGE ALRAALGVAP WLIKPNEEEL AEVCGSDLSA AVQSLRAQGI EHVLLSRGAA GVDWHGPDIA LRAVPPRVEV ASTVGAGDSL LAASLHGLLE GWPAERTLRL ATAVAAQAVT QIGFGIHDRE QLARLEAAVQ LHPIEE
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