| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0784 |
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| Symbol | |
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| ID | 5108878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 883449 |
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| End bp | 885491 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502000 |
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| Product | AsmA family protein |
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| Protein accession | YP_001186284 |
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| Protein GI | 146305819 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGCGCA TACGCAGAGC TTTGGCCTGG CTGGTCGCCG TGGTGTTGTT GCTGGTGGCG
GTGCTGATGT TGTTTCTCGC GCTGTTCGAC TGGAACCGTG CTCGGCCGCT GATCAACGAG
CAGGTGTCGA CGGCGCTGCA GCGGCCTTTC GCCATCGAGG GCGACCTGCG TGTGGTCTGG
AAGCCCGAGG CCGGGGAAAG GGGCCTGAGC GGCTGGCTGC CGTGGCCGCA TTTTTCTGCC
GAGCAGGTGC GCCTGGGCAA CCCTGAATGG GCGCAGGGCG ACACCTTCGT CAGCCTCGAC
AGCGCGCGTT TTCGCCTGGC GCCGCTGCCG CTGCTGTGGA AGACGGTGAG CATTCCGAGC
ATCGAGCTGG GCACCGCCCT CGTCGATCTG CAGCGCCTGG CCGACGGCCG CGCCAACTGG
AGCTTCGACC TCGGCAAGGA CGACGAGGCC GAGCCGCGCG ACGAGCCCGC GGCCTGGACC
CTGGACATCG GCACCATCGC CTTCGCCAGG GGTCATGTTC AGCTCGATGA CCGGAGCAGC
AAGACGCGCC TCGAAGCCGT GGTGGAGCCG CTCGGCGAGC CGATTCCCTT CGCCGATATC
GTCGGTAAGG GGGCTGCCGA TCGGGCGGCG GCGCAGGACT ATGCGTTCGC CTGGCGGACC
AAGGGCGATT TCCGCGGCCA GCCGATAACC GGCGACGGCA AGGTCGGTGG CCTGCTGGCG
TTGCACGATG CCTCGCTGCC TTTCCCGCTG CAGGCCGATC TGCGCATCGG CGCTACCCGT
ATCCGCGTCG CCGGCAGCCT GACCGACCCG CAGAACCTCG GCGCGCTGGA CCTGCGCCTG
CAGCTGTCCG GCAACAGCCT GAGCCAGCTC TACCCGCTGA CCGGCGTGAC CCTGCCCGAC
ACGCCCGCCT ACAGCACCGA CGGCAGGCTG CAGGCGGACC TGAGCGACGC CGATGGTGCG
ATCTTCCGCT ACCTCGATTT CAACGGGCGC ATCGGCGCCA GTGACATTCA TGGCGACCTG
ACCTTCGTCG CCCGCCAGCC GCGGCCCAAG CTCTCCGGCC AACTCACCTC CAATCAACTG
CTGTTCAGCG ACCTGGCGCC GCTGATCGGT GCCGACTCTG CCGCCGACAA GCGCAAGCGC
GGCGAGCAGG ATCGCCAGCC GGCGAACAAG GTGCTGCCCG TCGCGGAGTT TCGTACCGAG
CGCTGGCGCA CCATGGACGC CGACGTGCGT TTCGTCGGCA AGCGCATCGT GCACAGTGAG
CAGCTACCCA TCAGGAACCT CGACACCCAT GTGCTGCTCA ACGACGGCAT GCTCAGCCTG
GAGCCGCTGC GCTTCGGTAT GGCCGGCGGC ACGCTCGACG CGCAGATTCG CCTCAATGGT
GCGCTCACGC CGATGCAGGG TCAGCTGCGC CTGAGCGCGC GCGAGCTCAG GCTCAAGCAG
CTGTTCCCGA CCTTCGCGCC GATGCAGACC AGCCTTGGTG CGCTCAATGG CGACGCCAGT
CTCAGCGGCA GCGGCAATTC GGTGGCGGCC CTGCTGGGCG GTGCCAACGG CGAGCTGAAG
ATGCTGATCA ACGACGGGGC GGTCAGCCGC GGGCTGATGG AGATCGCCGG GCTGAACGTC
GGCAATTACC TGGTGGGCCG GCTGTTCGGT GACGAGGAGG TTAAGATCAA CTGCGCGGCC
GCCGACCTCG GCATCAAGCA GGGCCTGATG AGTACGCGCC TGTTCGTCAT CGACACCGAG
AACGCGGTGA TCAAGGTCGA TGGCAGCGCC AACTTCGCCA GCGAGCGCCT GGATTTCACC
ATCACCCCGG CGACCAAGGG CTTTCGCATC TTCTCCCTGC GTTCGCCGTT GTACGTGCGC
GGCACCTTCA AGCAACCGGC GCCGGGCGTG CAGGCGACGC CGCTGGCCCT GCGTGGTGCC
GGGCTGGTGG CATTGGGCGT GGCGGTGGCG CCGGCGGCCG GTCTGCTGGC GCTGGTGGCG
CCCAGCGCGG GTGACGAGCC GAGCCAGTGC GAGCCGCTGT TGCAGAAGAT CCGAGGTGGT
TAG
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| Protein sequence | MQRIRRALAW LVAVVLLLVA VLMLFLALFD WNRARPLINE QVSTALQRPF AIEGDLRVVW
KPEAGERGLS GWLPWPHFSA EQVRLGNPEW AQGDTFVSLD SARFRLAPLP LLWKTVSIPS
IELGTALVDL QRLADGRANW SFDLGKDDEA EPRDEPAAWT LDIGTIAFAR GHVQLDDRSS
KTRLEAVVEP LGEPIPFADI VGKGAADRAA AQDYAFAWRT KGDFRGQPIT GDGKVGGLLA
LHDASLPFPL QADLRIGATR IRVAGSLTDP QNLGALDLRL QLSGNSLSQL YPLTGVTLPD
TPAYSTDGRL QADLSDADGA IFRYLDFNGR IGASDIHGDL TFVARQPRPK LSGQLTSNQL
LFSDLAPLIG ADSAADKRKR GEQDRQPANK VLPVAEFRTE RWRTMDADVR FVGKRIVHSE
QLPIRNLDTH VLLNDGMLSL EPLRFGMAGG TLDAQIRLNG ALTPMQGQLR LSARELRLKQ
LFPTFAPMQT SLGALNGDAS LSGSGNSVAA LLGGANGELK MLINDGAVSR GLMEIAGLNV
GNYLVGRLFG DEEVKINCAA ADLGIKQGLM STRLFVIDTE NAVIKVDGSA NFASERLDFT
ITPATKGFRI FSLRSPLYVR GTFKQPAPGV QATPLALRGA GLVALGVAVA PAAGLLALVA
PSAGDEPSQC EPLLQKIRGG
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