| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0775 |
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| Symbol | |
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| ID | 5108869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 870765 |
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| End bp | 872468 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640501991 |
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| Product | type IV-A pilus assembly ATPase PilB |
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| Protein accession | YP_001186275 |
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| Protein GI | 146305810 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.621188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAA GCGTATCCCT CTCCGGCCTG GCCAAGCAGA TGGTGCTGGC CGAGCTACTG
GACGAAAAAG CCGCTCAACA GGCGCAACTG CAAGCTCAGC GCAATAAGCT GTCGCTGGTC
ACTTACCTGG TGCAGAACAA GCTGGTAAAG AGCCGTGCCC TGGCCGAATT AGCCGCCGAA
CAATTCGGCG TGGCTTTTTT TGACCTTAAC GCCATCGATA AAGAAGGACA GCCCAAGGAG
CTGGTCAGCG AGAAGTTGGT ACGCCAGCAT CGCGTACTGC CGCTATGGCG ACGTGGCAAC
AAGCTGTTCG TCGGGCTTTC CGACCCGACC AATCACCAGG CGGTCACGGA TGTGCAGTTC
AGCACCGGTC TCAATACCGA GGCGATTCTG GTCGAGGATG ACAAGCTGGG CGATGCCATT
GACAAGTTCT TCGACTCAGC CAATAGCGGC ATGGAGGATC TGGCCGACGT CGACCTGGAT
GGCTTGGACG TCGAGGCAGT AGATGATGAC AGGCCTGCCG GTGATGGCGG GGCCGATGCC
GATGATGCGC CAGTGGTGCG CTTCGTAAAC AAGATGCTAC TGGATGCAAT CAAAGGGGGC
TCATCGGACC TGCACTTCGA GCCGTACGAA AAGGCCTACC GGGTGCGCTT CCGTACCGAC
GGCCTGCTAC ATGAGGTAGC CCGCCCGCCG ATCCAGCTTG CGCCGCGCAT TTCCGCCCGT
CTCAAGGTAA TGGCCGCGCT GGATATCTCC GAGCGGCGCA AACCGCAGGA TGGCCGAATC
AAGATGAAAA TCTCAAAGAC CAAGGCCATC GACTTTCGCG TCAACACCCT GCCAACTCTG
TGGGGCGAGA AGATCGTGAT GCGGATTCTC GACCCCACCA GTGCACAGAT GGGCATCGAT
GCTCTAGGTT ACGAGGAAGC CCAGAAAGAG CTCTACCTAA GCGCCCTCAA ACAACCGCAG
GGCATGATTC TGGTCACCGG CCCTACGGGT TCCGGCAAGA CCGTATCGCT CTATACCGGC
CTGAATATTC TCAATACACC GGATGTGAAT ATCTCCACTG CCGAAGACCC TGTAGAGATC
AACCTGGAGG GCATCAATCA GGTCAACGTC AACCCCAAGC AGGGCATGGA TTTCACCCAG
GCGCTGCGCG CCTTCCTGCG CCAGGATCCG GACATCATCA TGGTCGGCGA GATTCGGGAC
CTAGATACGG CGTCCATTGC CGTCAAGGCC GCACAAACCG GCCATATGGT CATGTCTACC
CTTCACACCA ACAGCGCCGC GGAAACCCTG ACCCGCCTGC GCAATATGGG CGTGCCATCC
TTCAATATCG CCACCTCGGT CAACCTGATC ATCGCCCAGC GTCTGGCGCG CAAGCTGTGC
AACAGCTGCA AGAAGGAAGT AAACGTACCG CGTGAAACCC TGTTGGCGGA AGGCTTCCCT
GAAGACAAAA TCGGTACTTT CAAGATCTAC GGCCCGGTCG GTTGCGAGAA CTGCAAGGGC
GGTTACAAAG GCCGAGTCGG TATTTATGAA GTAGTTAAAA ACACGCCCAA CCTGCAGCGG
ATTATCATGG AGGAAGGCAA CTCCATCGAT ATTGCCGCGC AGATGCGTAA AGACGGCTTT
AATGACCTAC GCACCTCCGC TTTGCTCAAG GCCATGCAAG GGGTTACCAG CCTTGAGGAA
GTCAACCGCG TGACCAAGGA TTAA
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| Protein sequence | MNESVSLSGL AKQMVLAELL DEKAAQQAQL QAQRNKLSLV TYLVQNKLVK SRALAELAAE
QFGVAFFDLN AIDKEGQPKE LVSEKLVRQH RVLPLWRRGN KLFVGLSDPT NHQAVTDVQF
STGLNTEAIL VEDDKLGDAI DKFFDSANSG MEDLADVDLD GLDVEAVDDD RPAGDGGADA
DDAPVVRFVN KMLLDAIKGG SSDLHFEPYE KAYRVRFRTD GLLHEVARPP IQLAPRISAR
LKVMAALDIS ERRKPQDGRI KMKISKTKAI DFRVNTLPTL WGEKIVMRIL DPTSAQMGID
ALGYEEAQKE LYLSALKQPQ GMILVTGPTG SGKTVSLYTG LNILNTPDVN ISTAEDPVEI
NLEGINQVNV NPKQGMDFTQ ALRAFLRQDP DIIMVGEIRD LDTASIAVKA AQTGHMVMST
LHTNSAAETL TRLRNMGVPS FNIATSVNLI IAQRLARKLC NSCKKEVNVP RETLLAEGFP
EDKIGTFKIY GPVGCENCKG GYKGRVGIYE VVKNTPNLQR IIMEEGNSID IAAQMRKDGF
NDLRTSALLK AMQGVTSLEE VNRVTKD
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