Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0774 |
Symbol | |
ID | 5108868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 869545 |
End bp | 870762 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640501990 |
Product | type II secretion system protein |
Protein accession | YP_001186274 |
Protein GI | 146305809 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAA AAGCTCTAAA AACCAGCGCA TTCAAGTGGG AAGGCAAAGA CAGACGCGGC GCGGTCGTCT CCGGGGTCAT CAATGGGCAG AACCCCGCAT TGGTCAAGGC ACAGCTGCGC AAGCAGGGTA TCAACCCGAC CAAGGTACGC AAGGAGTCTT CTCTGTCCTT CGGCAAGGGT AAAAAGATCA AACCCATGGA TATCGCCCTG TTTACCCGGC AGATGGCGAC CATGATGAAG GCCGGTGTAC CACTGCTACA GTCCTTCGAC ATCATTGGCG AGGGCTTCGA CAATCCCAAT ATGCGCAAGC TGATCGATGA GGTGAAGCAG GAAGTGGCTG CCGGTAACAG CTTCGCTACC TCACTGCGAA AGAAGCCCGA GTACTTTGAC GAATTGTATT GCAATCTGGT TGAGTCTGGC GAACAGGCCG GCGCCTTGGA AAACCTGCTG GATCGCATCG CCACTTACAA GGAAAAAACC GAAGCGCTGA AGGCGAAAAT CAAGAAAGCG ATGAACTACC CCATCGCGGT AATTGTCGTC GCAGTTGTTG TCACAGCAAT CCTCCTCATT AAGGTAGTAC CTCAATTTCA AGACGTTTTT TCTAACTTCG GAGCAGAACT ACCGGCCTTC ACCCAAATGA TAATTGGACT ATCTGAAATC CTTCAAAAGT GGTGGTTTGT AGTACTAATC GCCCTAATGG GAAGCGCCTT CATTTTTAAA GAAAGCCTTA AACGCTCAAA AAAAATGAGA GATACCGTAG ACCGCGGAAT ACTAAAGCTC CCTATTGTCG GTGATATCTT ATACAAATCT GCCGTCGCCC GATTTGCTCG TACATTATCT ACAACCTTTG CCGCTGGCGT GCCGCTAGTG GATGCGCTGG ACTCTGTCTC CGGCGCCACC GGCAATGTCG TTTTCAAGAA TGCTACCAAC AAAATCAAAG CCGATGTTTC CACCGGCATG CAATTGAATT TCTCCATGCG CACCACCGGT ATTTTTCCGG CAATGGCGGT GCAGATGACT GCTATTGGGG AAGAGTCCGG CGCACTTGAT GAAATGCTTG ACAAAGTAGC TAGCTTCTAC GAGACCGAAG TGGACAACAT GGTCGATGGC CTGACTGCTC TTATGGAGCC CATGATAATG GCTGTTCTTG GTGTTTTAGT CGGCGGACTG GTAATTGCTA TGTACCTGCC TATCTTCCAG CTAGGCGCCG TCGTCTAA
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Protein sequence | MAEKALKTSA FKWEGKDRRG AVVSGVINGQ NPALVKAQLR KQGINPTKVR KESSLSFGKG KKIKPMDIAL FTRQMATMMK AGVPLLQSFD IIGEGFDNPN MRKLIDEVKQ EVAAGNSFAT SLRKKPEYFD ELYCNLVESG EQAGALENLL DRIATYKEKT EALKAKIKKA MNYPIAVIVV AVVVTAILLI KVVPQFQDVF SNFGAELPAF TQMIIGLSEI LQKWWFVVLI ALMGSAFIFK ESLKRSKKMR DTVDRGILKL PIVGDILYKS AVARFARTLS TTFAAGVPLV DALDSVSGAT GNVVFKNATN KIKADVSTGM QLNFSMRTTG IFPAMAVQMT AIGEESGALD EMLDKVASFY ETEVDNMVDG LTALMEPMIM AVLGVLVGGL VIAMYLPIFQ LGAVV
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