Gene Pmen_0765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0765 
Symbol 
ID5106944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp863780 
End bp865081 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content65% 
IMG OID640501981 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001186265 
Protein GI146305800 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCATC GCATCGTGAT TGTCGGCGGC GGCGCCGGCG GTTTGGAGCT GGCCACCCGT 
CTGGGTAGAA AACTGGGCAA GAGCGGCGCA GCCCGGATCA TCCTGGTCGA CGCCAATCTC
ACCCACATCT GGAAGCCCCT GTTGCACGAA GTGGCCGCCG GCTCGCTGAA CTCCTCCGAA
GACGAACTCA ACTATGTGGC CCAGGCCAAG TGGAACCATT TCGAGTTTCA GCTCGGGCGC
ATGTCCGGCC TCGACCGCGC AGGCAAGAGC ATCACGCTGG CAGCGACGCT GGACGACGAC
GGCCAGGTAC TGATGCCCGA GCGCCGCATC GCCTATGACA GCCTGGTGAT CGCAGTAGGC
AGCACCACCA ATGATTTCGG CACTCCGGGC GCGGCCGAGC ACTGCATCTT CCTCGATACC
CGGGCACAGG CCGAGCGCTT TCACCGACGC ATGCTCAGCC ACTATCTGCG CGCCCATGCC
AACGAAAGCG AAGCCGGCGG CCAGATCGAT ATCGCCATCG TCGGTGCGGG CGCCACGGGC
GTGGAACTGG CGGCGGAACT GCATCACGCT GCCAAGCAAC TGGCCGCATA CGGCCTCAAT
CGCATTCGCC CTGAAGACAT GCGCATCACC CTGATCGAGG CGGGCCCTCG CGTATTGCCA
GCCCTGCCCG AGCGCATCGC CCGCCCAGTG CACAAGACCC TGGAAAAGCT CGGCGTCACC
GTGTTGACCG GCGCCGCCGT CAGCGAAGTG ACCGCCGACG GCCTGAAGAC CGCCGACGGC
AATTTCATCC CGGCCAGCCT CAAGGTCTGG GCTGCCGGCA TCCGCGCGCC GGGCTTTCTC
AAGGATCTGG ATGGCCTGGA AAGCAACCGC ATCAACCAGC TACAGGTGCG CCCCACACTG
CAAACCACGC TGGACGATGA CGTGTTCGCC TTCGGCGATT GCGCTGCCTG CCCGCAACCG
GGCAGCGACG GCCGCAACGT GCCGCCACGG GCTCAGGCTG CGCACCAGCA GGCTTCGCTG
CTGGCCAAGT CGTTGCGGCT GAAGATCAGC GGTCAGGCGC TGCCGGAGTA CCGCTATCGC
GACTATGGTT CGCTGATCTC GCTGTCGAGC TTCTCCGCTG TGGGCAACCT GATGGGCAAC
CTCACCGGCA GCGTGATGCT CGAGGGCTGG CTGGCGCGGG TGTTCTACGT CTCGCTCTAC
CGCATGCACC AGATGGCGCT GTACGGCACC CTGCGCACGC TGTTGCTGAT GCTCAGCGAC
CGCATCGGCC GCAGCACCGA GCCGCGCCTG AAGCTGCATT GA
 
Protein sequence
MSHRIVIVGG GAGGLELATR LGRKLGKSGA ARIILVDANL THIWKPLLHE VAAGSLNSSE 
DELNYVAQAK WNHFEFQLGR MSGLDRAGKS ITLAATLDDD GQVLMPERRI AYDSLVIAVG
STTNDFGTPG AAEHCIFLDT RAQAERFHRR MLSHYLRAHA NESEAGGQID IAIVGAGATG
VELAAELHHA AKQLAAYGLN RIRPEDMRIT LIEAGPRVLP ALPERIARPV HKTLEKLGVT
VLTGAAVSEV TADGLKTADG NFIPASLKVW AAGIRAPGFL KDLDGLESNR INQLQVRPTL
QTTLDDDVFA FGDCAACPQP GSDGRNVPPR AQAAHQQASL LAKSLRLKIS GQALPEYRYR
DYGSLISLSS FSAVGNLMGN LTGSVMLEGW LARVFYVSLY RMHQMALYGT LRTLLLMLSD
RIGRSTEPRL KLH