Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0765 |
Symbol | |
ID | 5106944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 863780 |
End bp | 865081 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640501981 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_001186265 |
Protein GI | 146305800 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCATC GCATCGTGAT TGTCGGCGGC GGCGCCGGCG GTTTGGAGCT GGCCACCCGT CTGGGTAGAA AACTGGGCAA GAGCGGCGCA GCCCGGATCA TCCTGGTCGA CGCCAATCTC ACCCACATCT GGAAGCCCCT GTTGCACGAA GTGGCCGCCG GCTCGCTGAA CTCCTCCGAA GACGAACTCA ACTATGTGGC CCAGGCCAAG TGGAACCATT TCGAGTTTCA GCTCGGGCGC ATGTCCGGCC TCGACCGCGC AGGCAAGAGC ATCACGCTGG CAGCGACGCT GGACGACGAC GGCCAGGTAC TGATGCCCGA GCGCCGCATC GCCTATGACA GCCTGGTGAT CGCAGTAGGC AGCACCACCA ATGATTTCGG CACTCCGGGC GCGGCCGAGC ACTGCATCTT CCTCGATACC CGGGCACAGG CCGAGCGCTT TCACCGACGC ATGCTCAGCC ACTATCTGCG CGCCCATGCC AACGAAAGCG AAGCCGGCGG CCAGATCGAT ATCGCCATCG TCGGTGCGGG CGCCACGGGC GTGGAACTGG CGGCGGAACT GCATCACGCT GCCAAGCAAC TGGCCGCATA CGGCCTCAAT CGCATTCGCC CTGAAGACAT GCGCATCACC CTGATCGAGG CGGGCCCTCG CGTATTGCCA GCCCTGCCCG AGCGCATCGC CCGCCCAGTG CACAAGACCC TGGAAAAGCT CGGCGTCACC GTGTTGACCG GCGCCGCCGT CAGCGAAGTG ACCGCCGACG GCCTGAAGAC CGCCGACGGC AATTTCATCC CGGCCAGCCT CAAGGTCTGG GCTGCCGGCA TCCGCGCGCC GGGCTTTCTC AAGGATCTGG ATGGCCTGGA AAGCAACCGC ATCAACCAGC TACAGGTGCG CCCCACACTG CAAACCACGC TGGACGATGA CGTGTTCGCC TTCGGCGATT GCGCTGCCTG CCCGCAACCG GGCAGCGACG GCCGCAACGT GCCGCCACGG GCTCAGGCTG CGCACCAGCA GGCTTCGCTG CTGGCCAAGT CGTTGCGGCT GAAGATCAGC GGTCAGGCGC TGCCGGAGTA CCGCTATCGC GACTATGGTT CGCTGATCTC GCTGTCGAGC TTCTCCGCTG TGGGCAACCT GATGGGCAAC CTCACCGGCA GCGTGATGCT CGAGGGCTGG CTGGCGCGGG TGTTCTACGT CTCGCTCTAC CGCATGCACC AGATGGCGCT GTACGGCACC CTGCGCACGC TGTTGCTGAT GCTCAGCGAC CGCATCGGCC GCAGCACCGA GCCGCGCCTG AAGCTGCATT GA
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Protein sequence | MSHRIVIVGG GAGGLELATR LGRKLGKSGA ARIILVDANL THIWKPLLHE VAAGSLNSSE DELNYVAQAK WNHFEFQLGR MSGLDRAGKS ITLAATLDDD GQVLMPERRI AYDSLVIAVG STTNDFGTPG AAEHCIFLDT RAQAERFHRR MLSHYLRAHA NESEAGGQID IAIVGAGATG VELAAELHHA AKQLAAYGLN RIRPEDMRIT LIEAGPRVLP ALPERIARPV HKTLEKLGVT VLTGAAVSEV TADGLKTADG NFIPASLKVW AAGIRAPGFL KDLDGLESNR INQLQVRPTL QTTLDDDVFA FGDCAACPQP GSDGRNVPPR AQAAHQQASL LAKSLRLKIS GQALPEYRYR DYGSLISLSS FSAVGNLMGN LTGSVMLEGW LARVFYVSLY RMHQMALYGT LRTLLLMLSD RIGRSTEPRL KLH
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