| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0756 |
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| Symbol | |
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| ID | 5108850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 849469 |
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| End bp | 850830 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501969 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_001186256 |
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| Protein GI | 146305791 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGG CAAAACGCAT GTACGGCTGC ACCGAGTGCG GCGCCACCTT TCCCAAATGG
GCAGGGCAGT GTGGCGAGTG CGGGGCCTGG AACACCCTGG TGGAAACCGT TCTGGAAGGC
GCTTCGGCGC CGAGCGGGCG TACCGGCTGG GCTGGCCAGC AGGCGGCGCT GAAGACCCTG
GCCGAGGTCA GCGTCGAGGA AGTGCCGCGC TTTTCCACCG CCTCCGGCGA GCTGGACCGG
GTGCTCGGCG GTGGCCTGGT GGACGGCTCG GTGGTGCTGA TAGGCGGCGA CCCCGGCATC
GGCAAGTCGA CCATCCTGCT GCAGACCCTG TGCAATATCG CCACGCGCTT TCCGGCGCTG
TACGTCACCG GGGAGGAGTC GCAGCAGCAG GTGGCCATGC GCGCTCGCCG TCTGGGCCTG
CCCGAGGACA AGCTGAAGGT GATGACCGAG ACCTGCATCG AGTCGATCAT TGCCACCGCG
CGCCTGGAAA AGCCCAAGGT CATGGTGATC GACTCGATCC AGACCATCTT CACCGAGCAG
CTGCAGTCGG CGCCCGGCGG CGTGGCCCAG GTGCGCGAAA GCGCCGCCCT GCTGGTGCGC
TTCGCCAAGC AGAGCGGTAC CGCGGTCTTT CTGGTCGGCC ACGTGACCAA GGAAGGCGCG
CTGGCCGGCC CGCGCGTGCT GGAGCACATG GTCGACACCG TGCTGTATTT CGAGGGCGAA
TCCGACGGTC GCCTGCGCTT GCTGCGGGCG GTGAAGAACC GCTTCGGCGC GATCAACGAA
CTGGGCGTGT TCGGCATGAC CGACAAGGGC CTGAAAGAGG TCACCAACCC CTCGGCGATC
TTCCTCACCC GCGCCCAGGA GGAGGTGCCG GGCAGCGTGG TGATGGCCAC CTGGGAAGGC
ACCCGGCCGA TGCTGGTGGA GGTGCAGGCA CTGGTCGACA CCAGTCACCT GGCCAACCCG
CGGCGCGTCA CCCTGGGCCT GGATCAGAAC CGCCTGGCCA TGCTGCTGGC CGTGCTGCAT
CGTCACGGTG GTATTCCCAC CTACGATCAG GACGTGTTCC TCAACGTGGT CGGCGGGGTC
AAGGTGTTGG AGACCGCCTC GGACCTGGCC CTGATGGCGG CGGTGATCTC GAGTCTGCGC
AACCGTCCGT TGCCGCACGA TCTGCTGGTG TTTGGCGAGG TGGGGCTGTC CGGCGAGATC
CGCCCGGTAC CGAGCGGTCA GGAGCGTCTG AAGGAAGCCG CCAAGCATGG CTTCAAGCGC
GCCATCGTGC CCAAGGGCAA TGCGCCCAAG GAGGCGCCGG CGGGGCTTTC GATCATTGCT
GTGACGCGCC TGGAACAGGC GCTGGATGCG TTGTTCGAGT AA
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| Protein sequence | MAKAKRMYGC TECGATFPKW AGQCGECGAW NTLVETVLEG ASAPSGRTGW AGQQAALKTL
AEVSVEEVPR FSTASGELDR VLGGGLVDGS VVLIGGDPGI GKSTILLQTL CNIATRFPAL
YVTGEESQQQ VAMRARRLGL PEDKLKVMTE TCIESIIATA RLEKPKVMVI DSIQTIFTEQ
LQSAPGGVAQ VRESAALLVR FAKQSGTAVF LVGHVTKEGA LAGPRVLEHM VDTVLYFEGE
SDGRLRLLRA VKNRFGAINE LGVFGMTDKG LKEVTNPSAI FLTRAQEEVP GSVVMATWEG
TRPMLVEVQA LVDTSHLANP RRVTLGLDQN RLAMLLAVLH RHGGIPTYDQ DVFLNVVGGV
KVLETASDLA LMAAVISSLR NRPLPHDLLV FGEVGLSGEI RPVPSGQERL KEAAKHGFKR
AIVPKGNAPK EAPAGLSIIA VTRLEQALDA LFE
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