Gene Pmen_0751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0751 
Symbol 
ID5108845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp846160 
End bp847293 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content69% 
IMG OID640501964 
Product16S rRNA m(2)G 1207 methyltransferase 
Protein accessionYP_001186251 
Protein GI146305786 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCCA TGCCTATTTT CACCACCCCC TTTGCCAGCC TCGAGCTGCT GCGCCAGCCG 
CACCAGCCGA ACGAGCCCCT ACAGGCCTTC GACGCCGCGG ACGAGTACCT GCTCAATCAT
TTGCACGAAC AGGGCCTGCG TGCGGAGGAT TCGCTGCTGC TGCTCAACGA CAGCTTCGGC
GCCCTCGCCT GTTCGCTGGC CGGACGCTGC CAGGTGACCA GCAGCAGCGA TTCGCACCTG
GGCTTCATCG CCCTGGAGAA CAACCTCGCC GGCAATGGCC TGAATCGCGA CGCGGTGCGC
TTCCTGCCGA GCAGCGAGAC GCCGCAGGGA CCGTTCGACT GGGTGCTGAT CCGCGTGCCG
AAGACCCTGG CCCTGCTGGA AGAGCAGCTG ATCCGTCTGC ACGGCCAGTT GGCGCCGGGA
GCGCGGGTGG TGGCGGCCGC CATGGTCAAG CACCTGCCGC GCGCCGCCGG TGACCTGCTG
GAGAAATACA TCGGCCCGGT GCAGGCCTCG CTGGCGGTGA AGAAGGCCCG GCTGCTGCTG
GCCACGCCGG AGGCGAAAGC CGCGCCGCAC TCGCCCTACC CCACGCGCTA CCGGCTGGAC
AAGCCGGCGC TGGAGCTGAT CAACCACGCC AACGTGTTCT GCCGCGACGG TCTGGACATC
GGCACCCGCG CCTTCCTGCC ACACCTGCCG CGGCACCTCG ACGCGCGCCG CGTCGCCGAC
CTGGGGTGCG GCAACGGCGT GCTCGGCATC GCCTATGCGC TGGGCAGCCC GCAGGCGCAG
CTGACCCTGG TGGATGAGTC ATACATGGCC GTGCAGTCGG CGCGGGAAAA CTGGGCAGCG
GCGCTGGGCG AGCGACCAGC GACCATCCGC GCCGGCGACG GTCTGGCCGA ACAGCCGGCC
GGCTCGCTGG ACCTGGTGCT GTGCAATCCG CCGTTTCACC AGCAGCAGGT GGTCGGTGAT
TTTCTCGCCT GGCGCATGTT TCAACAGGCC CGCGCGGCGC TGGTGACCGG CGGCGAACTG
TGGATAGTCG GCAACCGCCA CCTGGGCTAT CACGCCAAGC TGGCGCGCCT GTTCCGCGGT
GTCGAGCAGG TGGCGGCCAA CCCCAAGTTC GTGGTGCTCA AGGCGAGCAA GTAA
 
Protein sequence
MVSMPIFTTP FASLELLRQP HQPNEPLQAF DAADEYLLNH LHEQGLRAED SLLLLNDSFG 
ALACSLAGRC QVTSSSDSHL GFIALENNLA GNGLNRDAVR FLPSSETPQG PFDWVLIRVP
KTLALLEEQL IRLHGQLAPG ARVVAAAMVK HLPRAAGDLL EKYIGPVQAS LAVKKARLLL
ATPEAKAAPH SPYPTRYRLD KPALELINHA NVFCRDGLDI GTRAFLPHLP RHLDARRVAD
LGCGNGVLGI AYALGSPQAQ LTLVDESYMA VQSARENWAA ALGERPATIR AGDGLAEQPA
GSLDLVLCNP PFHQQQVVGD FLAWRMFQQA RAALVTGGEL WIVGNRHLGY HAKLARLFRG
VEQVAANPKF VVLKASK