Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0751 |
Symbol | |
ID | 5108845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 846160 |
End bp | 847293 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640501964 |
Product | 16S rRNA m(2)G 1207 methyltransferase |
Protein accession | YP_001186251 |
Protein GI | 146305786 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTTCCA TGCCTATTTT CACCACCCCC TTTGCCAGCC TCGAGCTGCT GCGCCAGCCG CACCAGCCGA ACGAGCCCCT ACAGGCCTTC GACGCCGCGG ACGAGTACCT GCTCAATCAT TTGCACGAAC AGGGCCTGCG TGCGGAGGAT TCGCTGCTGC TGCTCAACGA CAGCTTCGGC GCCCTCGCCT GTTCGCTGGC CGGACGCTGC CAGGTGACCA GCAGCAGCGA TTCGCACCTG GGCTTCATCG CCCTGGAGAA CAACCTCGCC GGCAATGGCC TGAATCGCGA CGCGGTGCGC TTCCTGCCGA GCAGCGAGAC GCCGCAGGGA CCGTTCGACT GGGTGCTGAT CCGCGTGCCG AAGACCCTGG CCCTGCTGGA AGAGCAGCTG ATCCGTCTGC ACGGCCAGTT GGCGCCGGGA GCGCGGGTGG TGGCGGCCGC CATGGTCAAG CACCTGCCGC GCGCCGCCGG TGACCTGCTG GAGAAATACA TCGGCCCGGT GCAGGCCTCG CTGGCGGTGA AGAAGGCCCG GCTGCTGCTG GCCACGCCGG AGGCGAAAGC CGCGCCGCAC TCGCCCTACC CCACGCGCTA CCGGCTGGAC AAGCCGGCGC TGGAGCTGAT CAACCACGCC AACGTGTTCT GCCGCGACGG TCTGGACATC GGCACCCGCG CCTTCCTGCC ACACCTGCCG CGGCACCTCG ACGCGCGCCG CGTCGCCGAC CTGGGGTGCG GCAACGGCGT GCTCGGCATC GCCTATGCGC TGGGCAGCCC GCAGGCGCAG CTGACCCTGG TGGATGAGTC ATACATGGCC GTGCAGTCGG CGCGGGAAAA CTGGGCAGCG GCGCTGGGCG AGCGACCAGC GACCATCCGC GCCGGCGACG GTCTGGCCGA ACAGCCGGCC GGCTCGCTGG ACCTGGTGCT GTGCAATCCG CCGTTTCACC AGCAGCAGGT GGTCGGTGAT TTTCTCGCCT GGCGCATGTT TCAACAGGCC CGCGCGGCGC TGGTGACCGG CGGCGAACTG TGGATAGTCG GCAACCGCCA CCTGGGCTAT CACGCCAAGC TGGCGCGCCT GTTCCGCGGT GTCGAGCAGG TGGCGGCCAA CCCCAAGTTC GTGGTGCTCA AGGCGAGCAA GTAA
|
Protein sequence | MVSMPIFTTP FASLELLRQP HQPNEPLQAF DAADEYLLNH LHEQGLRAED SLLLLNDSFG ALACSLAGRC QVTSSSDSHL GFIALENNLA GNGLNRDAVR FLPSSETPQG PFDWVLIRVP KTLALLEEQL IRLHGQLAPG ARVVAAAMVK HLPRAAGDLL EKYIGPVQAS LAVKKARLLL ATPEAKAAPH SPYPTRYRLD KPALELINHA NVFCRDGLDI GTRAFLPHLP RHLDARRVAD LGCGNGVLGI AYALGSPQAQ LTLVDESYMA VQSARENWAA ALGERPATIR AGDGLAEQPA GSLDLVLCNP PFHQQQVVGD FLAWRMFQQA RAALVTGGEL WIVGNRHLGY HAKLARLFRG VEQVAANPKF VVLKASK
|
| |