| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0747 |
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| Symbol | |
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| ID | 5108841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 842013 |
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| End bp | 843020 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640501960 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_001186247 |
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| Protein GI | 146305782 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATCG ATCTTTCGCT GATCTGGGCG GTGATCATCG CCTTCGGCGT GATGATGTAC
GTGGTGATGG ATGGCTTCGA TCTGGGTATC GGCATCCTCT TTCCCTTCGT GCGTGACGAG
GGTGAGCGCG ACGTCATGAT GAACACCGTC GCGCCGGTCT GGGACGGCAA CGAAACCTGG
CTGGTGCTCG GCGGCGCCGG GCTGTTCGGC GCCTTTCCGC TGGCCTATTC GGTGGTGCTG
AGCGCCCTCT ACCTGCCGCT GATCCTGATG CTGCTGGGGC TGATCTTTCG CGGCGTGGCC
TTCGAGTTCC GCTTCAAGGC CAAGGCCGAC AGGCGCCACC TGTGGGACAA GGCCTTCATT
GGCGGCTCGC TGACTGCCAC CTTCTTTCAG GGGGTGGCGC TGGGTGCCTA TATCAATGGT
TTCGAAGTGG TGAATCGCAC CTATGCCGGC GGCCCGTTCG ACTGGCTGAC ACCCTTCTCG
GTGTTCTGCG GTCTGGCGCT GATCGCCGCC TATGCGCTGC TCGGCTGCAC CTGGCTGATC
ATGAAGACCG AGGGCCGCCT GCAGCAGCAG ATGCACGACA TGGCGCGGCC GCTGGTGCTG
GTGGTGCTCG GCGTGACCGG TATCGTCAGC CTGTGGACGC CCTTCGCTCA CCCGGCCATT
GCCGAGCGCT GGTTCAGCCT GCCCAACCTG TTCTGGTTCA TGCCGGTACC GGTGCTGGTG
CTGCTGTGCA CCTGGAAGCT GCTCAAGGCG GTGGCCGACA ATGCCAACTA TTCGCCCTTC
CTGCTGACCC TGGTGCTGAT CTTCCTCGGC TACAGCGGCC TCGGCATCAG CCTGTGGCCG
AACGTCATCC CGCCGTCGAT CAGCATCTGG GAAGCCGCCG CGCCGCCGCA GAGCCAGGGC
TTCATGCTGG TGGGCGCGCT GCTGATCATC CCCTTCATCC TGATGTACAC CGCCTGGAGC
TACTACGTGT TCCGCGGCAA GGTTACACAG GACGACGGCT ACCATTGA
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| Protein sequence | MGIDLSLIWA VIIAFGVMMY VVMDGFDLGI GILFPFVRDE GERDVMMNTV APVWDGNETW
LVLGGAGLFG AFPLAYSVVL SALYLPLILM LLGLIFRGVA FEFRFKAKAD RRHLWDKAFI
GGSLTATFFQ GVALGAYING FEVVNRTYAG GPFDWLTPFS VFCGLALIAA YALLGCTWLI
MKTEGRLQQQ MHDMARPLVL VVLGVTGIVS LWTPFAHPAI AERWFSLPNL FWFMPVPVLV
LLCTWKLLKA VADNANYSPF LLTLVLIFLG YSGLGISLWP NVIPPSISIW EAAAPPQSQG
FMLVGALLII PFILMYTAWS YYVFRGKVTQ DDGYH
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