| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0743 |
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| Symbol | |
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| ID | 5108837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 836183 |
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| End bp | 837175 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501956 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001186243 |
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| Protein GI | 146305778 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.191444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGATC TGACCGACGA TGTGGCGCTG ATGCGCCCGG TAATCGATGC CCTGCGTGCC
AGCGGAACCG ATCCTGACCG CGTGCTGGTG CGCGTTGGCC TGCCGCCCGG CGGGCTGCCG
GCCGGCCGTT TCCCCCATGC GGCGCAGGCG GCGTTCTGGA AGGCCGCCAG TGAAGAATGC
GGCGAGGAAC ATGTAGGCCT GTACCTGGCC CAGCACCTGC CGGCGTTTCA CGGCCTGCTG
CTGGAATATC TGTTTCTCTC CAGCGAAACC TTCGGTGCCG GCCTGCGCCA TGCCCTGCGC
TATGTGCGCC TGCTCTCCGA CACCCTCAAT GCGCGCCTGG ACGTGAGTGG CGAAGTGGCC
GTGCTGACCC TGGGCCTGGA CGCGGAAACG CCGCGGCACT TTCCGGAAAT GCTGGCCGGC
GCGGTGATCC GCCTGTTCGC CGCGCTGACC GAAAACGATT TTCGCCCGCG CGAAGTGCGC
TTCATGCATG CCGAAGGCGC GCCAGCCGAG CGCTACCAGG CCACCTATGG CTGTCCGGCC
CGCCTGGGCG CCGAGGACTG CGCGCTGGTC TTCGATGCCG CTGTGCTGAA CAAGGCCTCG
CGCCACGCCG CCCCGGAACT GCTGCGCATG CATGAGTCGC TGGCGCGGCG GCAACTGGCG
GAGGTGGAGC GGCTGGATCT GGTGCGTCAG GTGCGCGAGC TGATCGCCGA GCTGCTGGTC
GACGGCGGCG CGACGCTGGA GCAGGTAGCC GGCCGCCTGA ACATGCCGGC GCGGCGTCTG
CGTGAGCGCC TGGCCATGGC CGGCGTGCGC TTCAACGACC TGATCACCGA TTACCGCTGC
CGCCTGGCCA AGGAGCTGCT GCTCAAGACC GACGAGCGTA TCGAAGTGAT AGTCGAGCGC
ACCGGCTTTT CCGAGCCGAG CACCTTCTAC CGCGCATTCA AGCGCTGGGT CGGCGAAACG
CCGGTGGAGT TTCGCAAGCG CGGCAAGGCG TGA
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| Protein sequence | MRDLTDDVAL MRPVIDALRA SGTDPDRVLV RVGLPPGGLP AGRFPHAAQA AFWKAASEEC
GEEHVGLYLA QHLPAFHGLL LEYLFLSSET FGAGLRHALR YVRLLSDTLN ARLDVSGEVA
VLTLGLDAET PRHFPEMLAG AVIRLFAALT ENDFRPREVR FMHAEGAPAE RYQATYGCPA
RLGAEDCALV FDAAVLNKAS RHAAPELLRM HESLARRQLA EVERLDLVRQ VRELIAELLV
DGGATLEQVA GRLNMPARRL RERLAMAGVR FNDLITDYRC RLAKELLLKT DERIEVIVER
TGFSEPSTFY RAFKRWVGET PVEFRKRGKA
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