Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0742 |
Symbol | |
ID | 5108836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 835136 |
End bp | 835993 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640501955 |
Product | dehydratase |
Protein accession | YP_001186242 |
Protein GI | 146305777 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.780848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCATCG ACTGGCTCGA TCTCGACACC CCACCTGCCC TGCCCGGCCT GTTCCTGCGC GCCGCGCTGC GGCGCAAGGT CACCGGCCGT CAGTTGCCCG ACCTGGGCCT GCGCTGCCGC GTGGACATCG ATCCGCAGCA CCTGGCGCGC TATCGCCAGG TCTGCGGCAT TGCCGAGAGC GCCTATCTGC CGCCGGTGTA TCCGCACATC CTCGCCTTCC CATTGCAAAT GCAACTGCTC ACCGACCGCC GCTTCCCCTT TCCGCTGCTG GGCCTGGTGC ACCTGGAGAA CCGCATCCGC GTGCTGCGTC CGCTGGGCGG GCTGGGGCCG TTCCAGGTCA GCGTGCAGGT GAGCGATCTG CAGCCGCACG ACAAGGGCGC CACCTTCAGC CTGATCACCC GCCTGGAGGA CCAGCTCGGC CTGCTCTGGG AAGGCGACAG CCGCATCCTC TGTCGCGCCC TGCGCCTCGA CGGACAGCCG CAACCCCGAG CCGAACAGGA GCCCCTGCCG CTGGTGCCAC TGGCCGACTG GGCCGTGCCT GCCGCTACCG GCCGGCGTTA CGCCCGCGTG GCAGGCGACT ACAACCCGAT CCATCTGTAT GCCGTGACGG CAAAGCTGTT CGGTTTCCCC CGCGCCATCG CCCATGGTCT GTGGAACAAG GCCCGCAGCC TGGGCGCGCT GCAGGCGCAC CTGCCACTGG CCGGGTACGA GGTGGAGGTG CGCTTCCAGA AACCGGTGCT GCTGCCGACC CATGTCGCCC TGCAAGCCAG CGAGCCAGCC GCAAGCGGGC AGTTCCGCCT GATCGGCGAA AACGATACGC CGCATATGGC CGGGAGCTGG CAGCCGCTGC CTGCCTGA
|
Protein sequence | MAIDWLDLDT PPALPGLFLR AALRRKVTGR QLPDLGLRCR VDIDPQHLAR YRQVCGIAES AYLPPVYPHI LAFPLQMQLL TDRRFPFPLL GLVHLENRIR VLRPLGGLGP FQVSVQVSDL QPHDKGATFS LITRLEDQLG LLWEGDSRIL CRALRLDGQP QPRAEQEPLP LVPLADWAVP AATGRRYARV AGDYNPIHLY AVTAKLFGFP RAIAHGLWNK ARSLGALQAH LPLAGYEVEV RFQKPVLLPT HVALQASEPA ASGQFRLIGE NDTPHMAGSW QPLPA
|
| |