| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0735 |
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| Symbol | |
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| ID | 5108829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 830433 |
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| End bp | 831560 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501948 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001186235 |
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| Protein GI | 146305770 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.210672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG CCGAAGTACC GCGCCAGCCC AACACCTTCG CCCTGTGGCG CGAAGTGGAC
GACACGCGCA TCCGCACTCG CCTGGGCGGC TTCTTCTACC TGCTCGCCTG GCTGCTCACC
TGGGGTTTCA GCGCCTCGCC CGGCAGCCTG CTGGCCAGCG GTCTGCTGGG CACCATCCTG
TTCGCCGCGC TGCTCACGGC GCGCCTGCTG CATCGTCCGC ACGGCCTCGA CAGCCCGCTG
CAACTGCAGC GCTGGCTGGA TCACCACTGG GGGCTGATCC TGCTCACCGC CCTGTGCTGG
GGCCAGGCCC ACGCGTGGGT GCTGTACCGC AGCGAGTACG ACGACTCGGA GCTGATCGCC
ACCCTGGCCA CGGTGGCCTT CAGCACCGCA ATGACCTTCA ACTTCGCCAT GCGCCGCGGC
CGTGCACTGT TGGCGCTGGC CCTGCTCTAC CTGCCCGGCC TGGCGGTCCT GGCGCTGAAC
TGGCAGAGCA TGCACGCCAT GCTGATCACC CTGACCTGCT ACCTCGGCTA TCTGATTCTG
GTGCTCGGCC GCAATCACCG GGAATACCGC GCCACCCTGG AGCTGGAGTT GAAACTGCTG
GAGCAGCAGA GCCAGCTCGA TCTGCTCAGC CGCACCGACA GCCTGACCCA GCTGGGCAAC
CGCTATCAGT TCAACAACCT GTTCCCCAGC CTGGTGGCCA ATGCCCTGCG TCAGGGCGAG
CCGCTGTCGC TGGTGCTGCT GGACATCGAC TTCTTCAAGA AGGTCAACGA TGAGCACGGC
CACGCCGGTG GCGACGCCTG CCTGAGTGCC TTCGCCGAGC GCATGCGCCA GGTGTTTCGC
CGTGACGGCG ACGCGCTGCT GCGCCTGGGT GGCGAGGAAT TCGGCGTGCT GCTGCCCGGC
ACCACCCTGG CCCAGGCCCG GGAAATGGCC GAGCGCTTTC GCCAGGAGCT GGAAAGCGAA
GGACTGCAAC TGGCCGACCA GTGCCTGAAA CTGACCACCA GCCTCGGCGT CGGCAGTTTC
GACAAACGCC AGGACAGCGA TGCCGACGCC TTTTTCAGGC GCGTCGACAG CGCCCTCTAC
CGGGCCAAGC GCGAAGGCCG CAACCGTCTG GTTGCGGCTG ATCACTGA
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| Protein sequence | MTDAEVPRQP NTFALWREVD DTRIRTRLGG FFYLLAWLLT WGFSASPGSL LASGLLGTIL
FAALLTARLL HRPHGLDSPL QLQRWLDHHW GLILLTALCW GQAHAWVLYR SEYDDSELIA
TLATVAFSTA MTFNFAMRRG RALLALALLY LPGLAVLALN WQSMHAMLIT LTCYLGYLIL
VLGRNHREYR ATLELELKLL EQQSQLDLLS RTDSLTQLGN RYQFNNLFPS LVANALRQGE
PLSLVLLDID FFKKVNDEHG HAGGDACLSA FAERMRQVFR RDGDALLRLG GEEFGVLLPG
TTLAQAREMA ERFRQELESE GLQLADQCLK LTTSLGVGSF DKRQDSDADA FFRRVDSALY
RAKREGRNRL VAADH
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