| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0730 |
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| Symbol | |
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| ID | 5108824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 819463 |
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| End bp | 824457 |
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| Gene Length | 4995 bp |
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| Protein Length | 1664 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501943 |
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| Product | alpha-2-macroglobulin domain-containing protein |
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| Protein accession | YP_001186230 |
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| Protein GI | 146305765 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGGCT TGGCGATTTT TTCTGCGCAG CTCGTTCGCG CAAGGGCGCT CGGCTATAGT
TGTCGGCCTC TGCGCCCCCT GATTCCGGAG CCCGCAATGC CGAACAAAGG ACTGCTTCTG
GCCTTGGTGC TGACCCTGCT CAGCGCCTGT GATTCCTCTG AACCGCCTGC CACGGTCACC
CCAGCCGCCC CCGCTGCGCA ACAAGCGCAG GCGCCGAAGC CGACGATCGA TCGCGAAGCC
TTGGCCAAGC GTCATGCCGG CCGCGAGCTG GAGGTGGTGG ACGTCTCCGA AGTGCAGCTC
GATGGCGCCA GCGCGCTGTC GGTGACCTTC TCCATGCCGC TGGACCCCGA CCAGCCGTTC
GCCGAACGCC TGCACCTGGT CGACAGCAAG AGCGGCAAGG TCGACGGCGC CTGGGAACTG
ACCGACAACC TCAGTGAACT GCGCCTGCGC CATCTGGAGC CGCAGCGCAA GCTGGTACTG
ACCATCGATG CCGGGCTGCA GTCGATCAAT GGCGGCAAAC TCGCCAAAGA GCATGTCAGC
CGCCTGGAAA CCCGCGACCT GCAGGCCAGC GTCGGCTTCG CCAGCCGCGG TTCGCTGCTG
CCGACGCGCC TGGCCGAAGG CCTGCCGGTG ATCGCGCTGA ACGTCGACAA GGTCAACGTC
GAGTTCTTCC GTATCAAGCC CGAGGCGCTG CCGCGCTTTC TGTCGCGTTG GGGCCGCGCC
AGCAACCTGG ATACCTGGGA AGCCCGCGAG CTGTTGCCAA TGGCCGATCT GGTCTATGGC
GGCCGCTTCG ACCTGAACCC GGCGCGCAAT ACCCGTGAAA CCCTGCTCTT GCCCATCGCC
GGGCTGGAGC CGTTCAAGCA GCCTGGTGTT TATCTGGCGG TGATGCGCGA GGCTGGCAGC
TACAGCTACT CGCAGCCGGC GACGCTGTTT TCCCTGAGCG ATATCGGCCT GTCCGCGCAT
CGTTACCGTG ACCGTCTCGA CGTGTTCACC CAGGCGCTGG AGGGCGGCAA GGCGCAGTCC
GGCGTGCAGC TGGAGCTGCT CGATGGCGAT GGCGCGCTGC TCGCCGAAGG CAAGACCGAC
TCGGCCGGCC ATGCGCAACT GCCGCTACCG GCCAAGGCGC AGGTGCTGCT GGCCAAGCAG
GACGAGCAGA CCAGCCTGCT GCGCCTGAAC AGCCCGGCGC TGGACCTGGC CGAGTTCGAT
ATCGCCGGGC CCAAGGCGCA CGCGCTGCAG TTTTTCGTAT TCGGCCCGCG CGATCTGTAT
CGCCCCGGCG AGACCGTGCT GCTCAACGGC CTGCTGCGCG ATGCCGATGG CCGTCCGGTC
AAGGCTCAGC CGATCAGCGT CGAGGTGCGC CGCCCGGACG AGCAGATCAG CCGCAAGTTC
GTCTGGAACG CCGGCGATAA CGGCCTCTAT CAGTACCAGC TGCCGCTGGC CGAGGAGGCG
CCGACCGGCC GCTGGCAGCT GTTGCTCGAC CTGGGCGACG GCAGCCCGCA ACTCTACGAA
TTTCTCGTCG AGGACTTCCT GCCCGAGCGC CTGGCCCTGG AACTCAAGGG CCAGGAGCAG
CCCTACGCGC CGGGCGACAG CGCCGAGTTC GCGGTGACCG GACGTTACCT CTACGGTGCA
CCGGCCGCCG GCAATCGTCT GACTGGGCAA CTCTACGTAC GCCCATTGCG CGAAGCGGTG
GCGAGCCTGC CGGGCTACCA GTTCGGCGAC ATCACCGAGG CCGATCTGAG CCAGGACCAG
GAGCTCGACG AGATCAATCT CGACGACCAG GGCCGCGCCG TGCTGCGCCC GGAAAACCGC
TGGGGCGACG CCAAGTCGCC GCTGCGTCTG ATCCTCCAGG CCAGCCTGCA GGAGTCCGGC
GGCCGCCCGA TCACCCGCCG CATCGTCCAG CCGGTATGGC CGGCCGAGCG CCTGCCGGGC
GTGCGCGGGC TGTTCGAGGG CGAGGAGGTC GATGCCGACA GCCTGGCCGA ATTCGAAATA
CTGGTGGCCG ACGCCGCCGG CAACAAGCTG GCCGCCGACA GCCTCAACGT GCGCCTGGTG
CGCGAGCGCC GCGACTACTT CTGGAGCTTC TCCGATGGTG AGGGCTGGCG CCACAACTAC
AACGAGAAAT TCCTCACCTT GAGCGACGAG CCGCTCAAGG TCGCCGCCGG CGGCACCGCC
AAGGTCAGCT TCCCGGTGGA GTGGGGCCCG TACCGGGTCG AGGTGGTGGA CAACCAGACC
GGCCTGGTCA GCAGCCTGCG CTTCTGGGCC GGCTACCGCT GGCAGGACAA TGCCGATGGC
GGCGCCGTGC GCCCGGACCA GGTCAAGCTG GCCCTGGACA AGCCGGCCTA CGCCGCTGGC
GACGTGGCCC AGATCACCGT GACTCCGCCG GCTGCGGGCA ACGGCTACCT GCTGCTCGAG
TCCAGCGAGG GGCCGCTGTG GTGGCAGGAG ATCAGCGTGC CGGCAGGCGG CAAGACCTTC
GAGCTGCCCA TCGATGAGAA ATGGGCACGC CACGACCTCT ACCTCAGTGC GCTGGTGATT
CGCCCGGGCG AGCGCAAGGC GCAGGTCACC CCGAAGCGCG CGGTCGGCCT GCTGCACCTG
CCGCTGGAAC GCGCCCCGCG CAAGCTGGCG CTGAGCCTGG AAGCGCCGGA AAAAATGCGT
CCGAAGCAGC CGCTGAAGGT CAAGGTCAGT GCGCGCAACG CCGACGGCAG CATCCCCGAC
AAGGTGCATG TGCTGGTCGC CGCGGTGGAC GTGGGCATCC TCAACATCAC CAGCTACGCC
ACGCCCGATC CTTTCGCCAA CTTCTTCGGG CGCAAGGCCT ATGGCGCCGA CCAGCTGGAT
ATCTACGGTC AGCTGATCGA GGCCCAGGGG CGTGTTGCCA GCCTGGCCTT CGGCGGTGAC
GCCGGCCTTG CCGCCGGTGG CAAGCGCCCG GATACCAGCG TGCTGATCGT CGCGCTGCAG
AGCGATGCGC TGCAGCTGAA CGACACGGGT GAGGGCGAAG TCAGCCTGGA CATTCCCGAC
TTCAACGGCG AGCTGCGGCT GATGGCCCAG GCCTGGAGCG ACGAGCGCTT CGGCATGGCC
GAAGCCAAGA CGGTGGTCGC CGCGCCGTTG ATCGCCGAAC TGTCGATGCC GCGCTTTCTT
GCCGGCGGCG ACGAGACCAC CCTGGCGCTG GACCTGACCA ACCTGTCCGG CAGCGAGCAG
AAGCTCGATG TGCAACTGGG CGTTGAAGGC CAGCTGCGTC TGCTCGGCAA GGGTGAATCG
CCGATCAGTC TGAAGGATGG CCAGCGCACC ACCCTGCGTA TTCCGGTGCG CGCCGAGGGC
GGCCTGGGCC AGGGCCGTAT CCATGTCGAG GTGCAGGGCC TGGCGCTGCC GAACGAGACG
CTGGGCGACT TCAGTCGTGA GTGGACGCTG GGTATTCGCC CGGCCTACCC GGCGCAGCTG
CAGCACTTCC GCGCGGTGCT GGGGGAGGGC GAGCCCTGGA GCCTGCCGGC CGGCACCCTA
AACCAGTTCG AGCCTGCCGG GCTGGAGGCC GTGCTGGCGC TGTCGAGCCG CCCGCCGCTG
AACCTCGGCG AGCAGATCCG TGCGCTCAAG GCCTACCCCT ACGGCTGCCT GGAGCAGACC
ACCAGCGGCC TGTATCCGTC GCTCTACGCC GACGCCGCCA GCCTCAAACG CCTTGGCCTG
GAAGGCGAGC CGGACGAGCA GCGGCGCAAG AGCATCGAAC TGGGCATCGA GCGTCTGCTC
GGCATGCAGC GCCACAATGG CGGCTTCGGC CTGTGGAGCG CCGAAAGCGA AGAGGAATAC
TGGCTCACTG CCTATGTCAC CGACTTCCTT CTGCGCGCCC GCGAGCAGGG CTTTGGCGTA
CCGGCCGAGG CGCTGAAGAA GGCCAGTGAT CGCCTGCTGC GCTACCTGCA GCAGAGCAGC
CTGATCGAGG CCAGCTACAG CCAGGACTAC GCCCACACCC GCTTCGCCGT GCAGGCCTAT
GCCGGCTACG TTCTGGCGCG TAGCCAGCAG GCGCCGCTGG GCACGCTGCG CAGCCTGTTC
GACCGGCGCA GCGAGGCGCG CTCCGGCCTG CCGCTGGTGC AACTGGCCGC GGCGCTGAAA
CTGATGGGCG ATGCGCCGCG TGCCGAGCAG GCGTTGAGCC AGGGGCTGAT CCTGCAACGC
GATGGCGAGC GCTGGATGGC CGACTACGGC AGCCCGCTGC GTGATCAGGC GCTGATCCTC
GCCCTGTTGG AAGAGCACGA CCTGGCGGCC GGCCAGCGCG AGCAGCGGCT GTTCGACCTG
GCCGACGAAC TGGCCGGCCA GCGCTGGCTG TCGACCCAGG AGCGCAACGC GCTGTTCCTC
GCCGGGCGCG GTATTCTCGG CAAGCCGGAG CAGACCTGGA GCGCCAAGCT TGCCAGCGGC
ACCTTCCAGT TCGAGCTGAG CAACCAGCAG CCCGGCATCA AGCTCGAGCG TGGCGAACTG
GCCGAGCCGC TGAGCGTGAG CAACGCCGGC AGCGCCAAGC TGTATCAGCA GCTGACCCTG
TCCGGTTATC CGAGCCAGGC GCCGCGCGCC GGGGGCGAGA ACCTCAGCAT CGAGCGCGAG
TACCTGGGCA TGGACGGCCG TCCGCTCGAT CTGCAGCGTC TCGACAGCGG TGAGCTGGTG
CTGGTGCACC TGGCCGTGCG GGCCAAGCAG CGGGTACCGG ACGCGCTGGT GGTGGACCTG
CTGCCGGCCG GTCTGGAGCT GGAAAACCAG AACCTGGCAC AGAGTGCGGC GAGCCTCGAC
GACGCCGGCA GCAACGTCAA GGAATGGCGC CAGTCGATGC AGAACGCGCG GATCAAGCAC
CAGGAATATC GCGGCGACCG CTACGTGGCG GCGGTGGACG TGGAAGGCTA CGGCACCACC
CATCTGCTCT ACCTGGCCCG TGCGGTGACA CCGGGCAGCT ATCGGGTACC GCCACCTCAG
GTGGAGTCCA TGTACCGGCC GAGCTGGCAG GCGTTGGGGA GTGCGCCGGA GAGTCTGGTC
GTCAGGGGGC GCTAA
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| Protein sequence | MSGLAIFSAQ LVRARALGYS CRPLRPLIPE PAMPNKGLLL ALVLTLLSAC DSSEPPATVT
PAAPAAQQAQ APKPTIDREA LAKRHAGREL EVVDVSEVQL DGASALSVTF SMPLDPDQPF
AERLHLVDSK SGKVDGAWEL TDNLSELRLR HLEPQRKLVL TIDAGLQSIN GGKLAKEHVS
RLETRDLQAS VGFASRGSLL PTRLAEGLPV IALNVDKVNV EFFRIKPEAL PRFLSRWGRA
SNLDTWEARE LLPMADLVYG GRFDLNPARN TRETLLLPIA GLEPFKQPGV YLAVMREAGS
YSYSQPATLF SLSDIGLSAH RYRDRLDVFT QALEGGKAQS GVQLELLDGD GALLAEGKTD
SAGHAQLPLP AKAQVLLAKQ DEQTSLLRLN SPALDLAEFD IAGPKAHALQ FFVFGPRDLY
RPGETVLLNG LLRDADGRPV KAQPISVEVR RPDEQISRKF VWNAGDNGLY QYQLPLAEEA
PTGRWQLLLD LGDGSPQLYE FLVEDFLPER LALELKGQEQ PYAPGDSAEF AVTGRYLYGA
PAAGNRLTGQ LYVRPLREAV ASLPGYQFGD ITEADLSQDQ ELDEINLDDQ GRAVLRPENR
WGDAKSPLRL ILQASLQESG GRPITRRIVQ PVWPAERLPG VRGLFEGEEV DADSLAEFEI
LVADAAGNKL AADSLNVRLV RERRDYFWSF SDGEGWRHNY NEKFLTLSDE PLKVAAGGTA
KVSFPVEWGP YRVEVVDNQT GLVSSLRFWA GYRWQDNADG GAVRPDQVKL ALDKPAYAAG
DVAQITVTPP AAGNGYLLLE SSEGPLWWQE ISVPAGGKTF ELPIDEKWAR HDLYLSALVI
RPGERKAQVT PKRAVGLLHL PLERAPRKLA LSLEAPEKMR PKQPLKVKVS ARNADGSIPD
KVHVLVAAVD VGILNITSYA TPDPFANFFG RKAYGADQLD IYGQLIEAQG RVASLAFGGD
AGLAAGGKRP DTSVLIVALQ SDALQLNDTG EGEVSLDIPD FNGELRLMAQ AWSDERFGMA
EAKTVVAAPL IAELSMPRFL AGGDETTLAL DLTNLSGSEQ KLDVQLGVEG QLRLLGKGES
PISLKDGQRT TLRIPVRAEG GLGQGRIHVE VQGLALPNET LGDFSREWTL GIRPAYPAQL
QHFRAVLGEG EPWSLPAGTL NQFEPAGLEA VLALSSRPPL NLGEQIRALK AYPYGCLEQT
TSGLYPSLYA DAASLKRLGL EGEPDEQRRK SIELGIERLL GMQRHNGGFG LWSAESEEEY
WLTAYVTDFL LRAREQGFGV PAEALKKASD RLLRYLQQSS LIEASYSQDY AHTRFAVQAY
AGYVLARSQQ APLGTLRSLF DRRSEARSGL PLVQLAAALK LMGDAPRAEQ ALSQGLILQR
DGERWMADYG SPLRDQALIL ALLEEHDLAA GQREQRLFDL ADELAGQRWL STQERNALFL
AGRGILGKPE QTWSAKLASG TFQFELSNQQ PGIKLERGEL AEPLSVSNAG SAKLYQQLTL
SGYPSQAPRA GGENLSIERE YLGMDGRPLD LQRLDSGELV LVHLAVRAKQ RVPDALVVDL
LPAGLELENQ NLAQSAASLD DAGSNVKEWR QSMQNARIKH QEYRGDRYVA AVDVEGYGTT
HLLYLARAVT PGSYRVPPPQ VESMYRPSWQ ALGSAPESLV VRGR
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