| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0716 |
|---|
| Symbol | dipZ |
|---|
| ID | 5109046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 794498 |
|---|
| End bp | 796285 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640501929 |
|---|
| Product | thiol:disulfide interchange protein precursor |
|---|
| Protein accession | YP_001186216 |
|---|
| Protein GI | 146305751 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4232] Thiol:disulfide interchange protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTGC GTCGACTGTT GCTTCCCCTG CTTCTGCTCT GCCTGAGTCT GCCCGCCAGC
GCCAATCTGT TCGATCAGCG CCCGGCCGCG TCGCCGATTG GTGCGCCGCT GAACAACAGC
AGCGATTTCC TGCCGGTGCG TGAAGCCTTC AAGCTGAGCC TGGTCGACAG CGACGCCCAG
GCGGTGACCC TGCGCTTCGT CGCTGCCGAG GGCTATTACC TCTATCGCCA CCGCTTCAAT
TTCAGCGTCG AGCCGGCCGA TCTGGTCCTC GGCGAGGCCG AGCTGCCCGC CGGCCAGGCC
AAGCACGACG AGTTCTTCGG CGATGTCGAG GTCTATTACG GTGTGCTGGA TATCCGCCTG
CCGCTGGACA ACCCGGAGCA GCGCCCGCTG CGCCTGCAGG TCGGCTATCA GGGCTGCGCC
GACAAGGGCC TGTGCTATCC GCCGGAGACC GAGTTCATCG AGATCGGCGA GATGCCCGCC
ACCGCCGACA CCGGCCGCCT GACGCCCCTG GGCGCAACGG CAGCGGCCTG GAACTGGAAG
GAGCTGGCCC TGTTCTTCCT CGGCGGCCTG GCGCTGACCT TCACGCCCTG CGTGCTGCCG
ATGCTGCCGA TCCTCTCCGG AGTGGTACTG CGCGGCCAGT TCGGCGGCAT GCGCGGGCTG
ACCCTGTCGC TGGCCTACGT ACTGCCGATG GCCCTGTGCT TCGCCATTCT CGGCACCCTG
ATGGGACTGT TCGGCGCCGG CCTCAATCTG CAGGCGCGCC TGCAGTCGGC CTGGGTACTG
GTGCCCTTCG CCGCCTTCTT CACCGTCTTC GCCCTGGCCA TGTTCGGCCT CTTCGAGCTG
CGCCTGCCGC GCGCCATCAG CGACCCGCTG GATCGCCTGG CAAGCAAGAC CCATGGCGGC
TCGCATCTGA ATGCCGCCCT GCTCGGCGTG CTCTCCAGCC TGCTGGTCAG CCCCTGCGTA
TCGGCGCCCC TGGCCGGCGC CCTGCTCTAT ATCAGCGCCA GCGGCGATGC CCTTGGCGGC
GGCCTCAGGC TGCTCGCCCT GGGCCTTGGC ATGGGCACGC CGCTGGTGCT GTTCGCCGTC
GGTGGCGGCG CGCTGCTGCC CAAGACCGGC ACCTGGATGG TCAGCGTGCG CAATGCCTTC
GGCGTGCTGC TGCTGGCCGT CTCGGTGTGG CTGCTGGAGC GCGTGCTGCC AGGCAGCCTC
AGCCTGGCAC TATGGGGCCT GCTGGCCGGT GGTGTGGCGG TGTTCCTCGG TGCGCTGGAG
TTCGGCCCCA AGACGCACCG GCAGAAGCTT GGCCAGATCG CCGGACTGGC GCTGCTGGTC
TATGCCCTGG CCGCCTGGGT CGGCGCGCTG CAGGGCGCGA GCGATCCGCT CCGGCCGCTC
GGCCAGTTGC AGGCCGGCAG CGGCGCGGTG AGTGCCAAGA GCGGTGCCTG GCAAACCCTG
AGCAGCCCGG CCGAGCTGGA CGCAGCCCTG GCCGAGGCGA AGAACGCAGG CCAGCCCCTG
CTGCTGGACT GGTATGCCGA CTGGTGCATC AGTTGCAAGG TCATCGAGCG CGAAGTGTTC
GGCAATGCCG AGGTGGGCAG CAAACTGGCC GGCTGGCGCC TGATCCGCTT CGACATCACC
GACAGCAACC CCGCCCAGCG CGCCCTGCTC GATCGCTACC GCCTGTTCGG CCCACCCGCC
ATTCAGCTGT TTGCCGGCAA TGGTGACGAA TTGCTCGATC TGCGTGTCGT AGGTGAGGTC
GATGCCGCCA CCTTCGCCGC GCGTCTGGAT CAGGCCAGCA CGCGCTAG
|
|---|
| Protein sequence | MSLRRLLLPL LLLCLSLPAS ANLFDQRPAA SPIGAPLNNS SDFLPVREAF KLSLVDSDAQ
AVTLRFVAAE GYYLYRHRFN FSVEPADLVL GEAELPAGQA KHDEFFGDVE VYYGVLDIRL
PLDNPEQRPL RLQVGYQGCA DKGLCYPPET EFIEIGEMPA TADTGRLTPL GATAAAWNWK
ELALFFLGGL ALTFTPCVLP MLPILSGVVL RGQFGGMRGL TLSLAYVLPM ALCFAILGTL
MGLFGAGLNL QARLQSAWVL VPFAAFFTVF ALAMFGLFEL RLPRAISDPL DRLASKTHGG
SHLNAALLGV LSSLLVSPCV SAPLAGALLY ISASGDALGG GLRLLALGLG MGTPLVLFAV
GGGALLPKTG TWMVSVRNAF GVLLLAVSVW LLERVLPGSL SLALWGLLAG GVAVFLGALE
FGPKTHRQKL GQIAGLALLV YALAAWVGAL QGASDPLRPL GQLQAGSGAV SAKSGAWQTL
SSPAELDAAL AEAKNAGQPL LLDWYADWCI SCKVIEREVF GNAEVGSKLA GWRLIRFDIT
DSNPAQRALL DRYRLFGPPA IQLFAGNGDE LLDLRVVGEV DAATFAARLD QASTR
|
|---|
| |