| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0715 |
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| Symbol | |
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| ID | 5109045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 793908 |
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| End bp | 794354 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640501928 |
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| Product | 3-dehydroquinate dehydratase |
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| Protein accession | YP_001186215 |
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| Protein GI | 146305750 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
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| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.583785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCC TTCTGGTGCT GCACGGCCCC AACCTCAACC TGCTGGGCAC CCGCGAGCCC
GACAAGTACG GCGCCACCAC CCTCGCCGAA ATCAATCAGG ATCTGGAGCG CCGCGCCCGC
GAGGGCGGCC ACCATCTGCT GCATCTGCAG AGCAACGCCG AGTACGAGCT GATCGAGCGC
ATTCATGCGG CGAAAAGCGA AGGTGTCGAC TTTATCCTGA TCAATCCTGC CGCTTTTACC
CATACCAGCG TCGCATTACG TGACGCATTG CTGGCGGTGA GCATCCCATT CATCGAAGTG
CACCTGTCCA ACGTGCACAA GCGTGAACCT TTCCGCCATC ACTCCTACTT TTCCGACGTT
GCCGTAGGGG TGATTTGCGG CCTTGGCGCC AGCGGTTATC GGCTGGCCCT GGAAGCGGCA
CTCGAACAAC TGACCGGGCG CGCCTGA
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| Protein sequence | MATLLVLHGP NLNLLGTREP DKYGATTLAE INQDLERRAR EGGHHLLHLQ SNAEYELIER
IHAAKSEGVD FILINPAAFT HTSVALRDAL LAVSIPFIEV HLSNVHKREP FRHHSYFSDV
AVGVICGLGA SGYRLALEAA LEQLTGRA
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