| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0713 |
|---|
| Symbol | |
|---|
| ID | 5109043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 792020 |
|---|
| End bp | 793375 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640501926 |
|---|
| Product | acetyl-CoA carboxylase biotin carboxylase subunit |
|---|
| Protein accession | YP_001186213 |
|---|
| Protein GI | 146305748 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAGC TGGAAAAAGT CCTTATCGCC AACCGTGGCG AAATCGCCCT GCGCATCCTG
CGCGCCTGCA AGGAACTGGG CATCAAGACG GTGGCCGTGC ACTCCACCGC CGACCGCGAA
CTGATGCACC TGGGCCTGGC CGACGAGTCC GTCTGCATTG GTCCGGCGCC CGGGGCGAAG
TCCTACCTGA ACATCCCGGC CATCATCAGC GCCGCTGAAG TGACCGGCGC CACCGCCATC
CACCCGGGTT ACGGCTTCCT CGCCGAGAAC GCCGACTTCG CCGAGCAGGT GGAGAACTCC
GGCTTCGCCT TCATCGGCCC GAAAGCCGAC GTGATCCGCC TGATGGGTGA CAAGGTGTCG
GCCAAGGACG CCATGATCAA GTCCGGCGTG CCGGTGGTAC CGGGCTCCGA CGGCCCGCTG
CCGGAAGACG AGGAAGAGGC CCTGCGCATC GCCCGCGAAG TGGGCTACCC GGTGATCATC
AAGGCCGCCG GCGGCGGCGG TGGTCGCGGC ATGCGCGTGG TGCACAAGGA AGAAGACCTG
ATCAAGTCGG CCAAGCTGAC CCGCACCGAA GCCGGTGCCG CGTTCGGCAA CCCGATGGTC
TATCTGGAAA AGTTCCTCGG CAACCCGCGT CACGTGGAAG TCCAGGTGCT GTCCGACGGC
CAGGGCAACG CCATCCACCT GTATGACCGC GACTGCTCGC TGCAGCGTCG CCACCAGAAG
GTGATCGAGG AGGCTCCGGC CCCGCTGATC GACGAGAAGG CCCGCGCCGA AGTGCTCAAG
CGCTGCGTCG ATGCCTGCGT CGAAATCGGC TACCGTGGCG CCGGCACCTT CGAGTTCCTC
TATGAAGACG GCCGTTTCTA CTTCATCGAG ATGAACACCC GCGTTCAGGT GGAGCACCCG
GTCACCGAGA TGGTCACCGG CATCGACATC GTCAAGGAGA TGCTCAGCAT CGCCGCCGGC
AACAAGCTGT CGATCAAGCA GGAAGACGTG AAGATCCTCG GCCACTCCAT CGAGTGCCGG
ATCAACGCCG AAGACCCGGA CAACTTCATG CCCAGCCCCG GCAAGGTCAA GCATTTCCAT
GCTCCGGGCG GCAATGGCGT GCGTGTCGAC TCGCACCTGT ACAGCGGCTA CAGCGTGCCG
CCGCACTACG ACTCGCTGAT CGGCAAGCTG ATCACCTTCG GCAAGGATCG CGACGAGGCC
ATGGCGCGCA TGCGCAACGC CCTGGACGAG ATCGTGGTCG ACGGCATCAA GACCAACGTG
CCGCTGCACC GCGACCTGAC CCGTGACAAG GGTTTCGTCA AAGGCGGCGT GAACATCCAC
TACCTGGAAA AGAAACTGGG TATGGACAAG CACTGA
|
|---|
| Protein sequence | MQKLEKVLIA NRGEIALRIL RACKELGIKT VAVHSTADRE LMHLGLADES VCIGPAPGAK
SYLNIPAIIS AAEVTGATAI HPGYGFLAEN ADFAEQVENS GFAFIGPKAD VIRLMGDKVS
AKDAMIKSGV PVVPGSDGPL PEDEEEALRI AREVGYPVII KAAGGGGGRG MRVVHKEEDL
IKSAKLTRTE AGAAFGNPMV YLEKFLGNPR HVEVQVLSDG QGNAIHLYDR DCSLQRRHQK
VIEEAPAPLI DEKARAEVLK RCVDACVEIG YRGAGTFEFL YEDGRFYFIE MNTRVQVEHP
VTEMVTGIDI VKEMLSIAAG NKLSIKQEDV KILGHSIECR INAEDPDNFM PSPGKVKHFH
APGGNGVRVD SHLYSGYSVP PHYDSLIGKL ITFGKDRDEA MARMRNALDE IVVDGIKTNV
PLHRDLTRDK GFVKGGVNIH YLEKKLGMDK H
|
|---|
| |