| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0706 |
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| Symbol | |
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| ID | 5109036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 781943 |
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| End bp | 784729 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501919 |
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| Product | integral membrane sensor hybrid histidine kinase |
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| Protein accession | YP_001186206 |
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| Protein GI | 146305741 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.357941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCGGC TCAGGATTGC CATCGGACTA CTCGCCAGCC TGCTGTTGCT CGGCCTCAGC
CTGACAGCCA GCGCCGCCCC GTCCTCGACG GGCACCCAGA GCTGGTCCTA TCTGGTCGAC
GCCAGCGCCC GCCTGGGCCT GGAAGAAATA CGCGCCCAGC GCCAGCAGTT CAAGCCGCTT
AGCAAACAGT CCTTCACCTT CCCGCCGAGC CAGCACGCCG TCTGGCTGCG CGTCGAACTC
GCCCCGCAAC AGCAGCCCGC CTGGCTTTGG GTCTTTTCGC CGCGGGTGCA GTACCTCGAC
TACTACCTGC TCAGGGATGG CCAGCTGGAG CAGAACCTGC ACACCGGCGA AGCCATGCCG
CTGGACTCGC GTCCGCTGCC TTCGCGCTTC TACCTGATGC CCCTGCCCAA CGACGGCCAG
GCCCGCGTCG CCTACGTCCG GCTGACGTCC AACCATCCGC TGATGACCTG GTTCAAGGTC
ATGGATCAGG CCGAACTGGT CAGCCTGGAA AAGCCCGCCT ACCTCTACGG CATGCTGTTC
GGCGCCCTGC TGCTGCTGAC CCTGTACAAC CTCATCCGCT TCTTCTACAG CCGCAGCGCC
ACCGGTCTGT GGCTGGCAGG GGTGAATATC GGTCTGGCGG TGTGTTCGTC GGCCAATCTC
GGCATTTTCG CCCAGTGGTT GCCCAGCCTG GGCTACAACC AGTCGCTGAT CGCCGATCTG
TCGGCGCTGT TCGCCGCCTT CAGCGCCCTG GCCTTCGGCC TGAGCTTCTT CCATGGCACC
ACGGTGCAGC ACAGCCCGCT CAACCGCCTG CTGCAGGGCA ACGCGCTGCT GTTGCTGGTG
TATGCGCTGT GCATCGCCCT GACCGGGTTG TTCTGGTTCA GCTCGCTGGT CTATCTGCTG
GTGGCGTTGA GCAGCCTCAA CCTGCTGCTG GTGGGCAGCC TGCACTGGCG CGCCGGTTAC
CAGCCGGCGC GGCTGATCGC CGTGGGCATG CTGGTGTTCA ACCTCGGCTT CGGCTTCTTC
GTGCCGGTGC TGCTCGGCTT CGATCAGCTC AACCCGGGCT GGCTGGTGCT CGGCGTGTTC
AGCGTGGCGA CCCTGGCCGG TCTGATCCTC AGCGTCTCGC TGACCGAACG TCAGCGGCAG
ATCACCTCCG ACACCCTCGA CAGCCGCACC GCGCTGGCCG CCAGCAGCGC CGAGCTGCGC
GCCAAGGCCG AGTTCCTGGC CAAGATCAGC CACGAGATCC GTACGCCGAT GAACGGCGTG
CTGGGCATGA CCGAACTGCT GCTGGGCACG CCGCTGTCGG CCAAGCAACG CGACTACGTG
CAGACCATCC ACAGCTCGGG CAACGAGCTG CTCACCCTGA TCAACGAAAT TCTCGACATT
TCCAAGCTCG AATCCGGGCA GATCGAACTG GACGACGTGC AGTTCGACCT CGGCGCGCTG
ATCGAGGACT GCCTCGACAT CTTCCGCGCC AAGGCCGAGC AACAGAAGGT GGAGCTGATC
AGCTTCATCC AGCCGCAGGT GCCGCGGGTG ATCAGCGGTG ACCCCACGCG CCTGCGCCAG
GCCCTGCTGA GCCTGCTGGA CAACGCCTTC AAGCAGACCG ACGAGGGCGA GATCCTGCTG
GTCGCGGCAC TCGACAGCAG CGACGGCAAG CACCGCCTGC GCATCGCCGT GCAGGACAGC
GGCCGGCCGC TGCTGCCGGA AGAGCGCGAC GCCCTGCTCA ACGCCGAACT GCAGAGCCGC
GACTTCCTCT CCGCCACCCG CCTGGGCGGG CGCCTCGGCC TGATCATCGC GCGCCAGCTG
GTGCGCCTGA TGGGTGGCGA GTTCGGCATT CAGGGCAGCA GCAACCAGGG CACCACCCTG
TGGCTGGCCC TGCCGCTGGA CCCCGCCCGC CTGGAACAGC CGGAAACCGA TCTGGACAGC
CCGCTGCAGG GTGCGCGCCT GCTGGTGGTG GACGACAACG ACACCTGCCG CAAGGTGCTG
GTGCAGCAAT GCAATGCCTG GGGTCTGCAG GTCAGCGCCG TGCCCTCCGG CAAGGAGGCC
CTGGCCCTGC TGCGCACCAA GGCGCACATG CGCGAGTACT TCGATGCGGT GCTGCTGGAC
CAGGACATGC CCGGCATGAC CGGCATGCAA CTGGCGGCCA AGATCAAGGA AGACCCCAGC
CTCAACCACG ACATCCTGAT CATCATGCTC ACCGGCATCA GCAACGCGCC GAGCAAGGTG
ATCGCACGCA ACGCCGGGAT CAAGCGCATC CTGGCCAAAC CGGTGGCCGG CTACACGCTC
AAGACCACCC TGGCCGACGA GCTGGCCCAG CGCCCCAACG ACAGTCCTGC GCAGGCCGCA
CCGACGCCGG TGAGCACGCC GCTGAACGTG CCGGCCGACT TCCGCATTCT GGTGGCCGAG
GACAACAGCA TCTCCACCAA GGTCATCCGC GGCATGCTCG GCAAGCTCAA TCTCAAGCCG
GATACCGCCA GCAACGGCGA GGAAGCCCTC AGCGCGATGA AGGCACAACC TTACGATCTG
GTGCTGATGG ACTGCGAGAT GCCGGTGCTC GACGGCTTCT CCGCCACCGA ACAGCTGCGC
GCCTGGGAAA AGAGCGAGAA GCGCCCGCGC ACGCCGGTGG TGGCACTGAC CGCGCATATC
CTCAGCGAAC ACAAGGAACG CGCGCGCGCC GTGGGCATGG ACGGACACAT GTCCAAGCCG
GTGGAACTGT CGCAACTGCG CGAGCTGATC GAGCACTGGA TCGCCGAACG CGAACTGCGT
CGCCAGCGCG ATGCGCTGCC ACACTGA
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| Protein sequence | MRRLRIAIGL LASLLLLGLS LTASAAPSST GTQSWSYLVD ASARLGLEEI RAQRQQFKPL
SKQSFTFPPS QHAVWLRVEL APQQQPAWLW VFSPRVQYLD YYLLRDGQLE QNLHTGEAMP
LDSRPLPSRF YLMPLPNDGQ ARVAYVRLTS NHPLMTWFKV MDQAELVSLE KPAYLYGMLF
GALLLLTLYN LIRFFYSRSA TGLWLAGVNI GLAVCSSANL GIFAQWLPSL GYNQSLIADL
SALFAAFSAL AFGLSFFHGT TVQHSPLNRL LQGNALLLLV YALCIALTGL FWFSSLVYLL
VALSSLNLLL VGSLHWRAGY QPARLIAVGM LVFNLGFGFF VPVLLGFDQL NPGWLVLGVF
SVATLAGLIL SVSLTERQRQ ITSDTLDSRT ALAASSAELR AKAEFLAKIS HEIRTPMNGV
LGMTELLLGT PLSAKQRDYV QTIHSSGNEL LTLINEILDI SKLESGQIEL DDVQFDLGAL
IEDCLDIFRA KAEQQKVELI SFIQPQVPRV ISGDPTRLRQ ALLSLLDNAF KQTDEGEILL
VAALDSSDGK HRLRIAVQDS GRPLLPEERD ALLNAELQSR DFLSATRLGG RLGLIIARQL
VRLMGGEFGI QGSSNQGTTL WLALPLDPAR LEQPETDLDS PLQGARLLVV DDNDTCRKVL
VQQCNAWGLQ VSAVPSGKEA LALLRTKAHM REYFDAVLLD QDMPGMTGMQ LAAKIKEDPS
LNHDILIIML TGISNAPSKV IARNAGIKRI LAKPVAGYTL KTTLADELAQ RPNDSPAQAA
PTPVSTPLNV PADFRILVAE DNSISTKVIR GMLGKLNLKP DTASNGEEAL SAMKAQPYDL
VLMDCEMPVL DGFSATEQLR AWEKSEKRPR TPVVALTAHI LSEHKERARA VGMDGHMSKP
VELSQLRELI EHWIAERELR RQRDALPH
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