| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0700 |
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| Symbol | |
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| ID | 5109030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 771701 |
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| End bp | 773269 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501913 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001186200 |
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| Protein GI | 146305735 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.214465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACTG CCCTTACCCG AATTCTCCTG AGCCTGCTGC TGTGGCTGCC ACTGGCGGCG
CAGGCTGGCG AGGCCGACGA TTTCGTCGCT GCCAACGCCG GCAAGCAGGC CAAACTGCTG
CAGGACTGGG CCGCCGCGCC CAACGCCGAA CGCCTGCCAC TGCTGCAGGC CCTGCAGCAG
GGCCGCGTCG GCAGCGACGC CGACAAGCGC GCCTTTATCG AACAGAGCGG CACCTGGCAG
GCCGCCGATG GTGCAGCCGA AGCCAACGGC ACGCCGCGCA AACTGCGCCT GAACAACCGT
CTGCGCGGCC TGCTGGGCGT GGCCATGGCC AGCCATCAGT TGCTCGCTGA CGATGCCGCC
GCGCGCCTGG CCGCCGCCAA GCAGTTGCAA CGCAATACGC CGCCGGCACT GCTGCCGCTG
CTGGAAAGCC GGCTGAGCAT CGAAGCCGAT GAAACCGTGC GGGACGCCAT TACCCTGGCC
CTGGCCAACC TGCAGCTGGA GGCCAGCGAC CCGAGCGTGC GCCTGGCCGC CGTGGAGCGC
CTGGGCAGAA CCGGCGACCC GCTGGCGCGC ACGCGTCTGC AGAGCCTGCT CGATGGCGAG
GAAAGCGATG CCGCCGTGCG CGCCGCCGCC GAGAAAAGCC TGGCCCAGGT GAAGAACAAA
CTGCTGATCG GCGAACTGCT CGGCCAGGCC TTCAGTGGCC TGTCGCTGGG TTCGATCCTG
CTGCTCGCCG CCCTCGGCCT GGCCATCACC TTTGGCCTGC TCGGGGTGAT CAACATGGCC
CACGGCGAGA TGCTGATGCT CGGCGCCTAC ACCACCTATG TGGTGCAGCT GAGCTTCCAG
CGCCTGGCCC CCGAATACCT CACGCTCTAC CCGCTGGCCG CGCTGCCCAT CGCCTTTCTG
GTCACGGCCT GCATCGGCAT GGCGCTGGAG CGCACGGTGA TCCGCCATCT CTACGGCCGC
CCGCTGGAAA CCCTGCTGGC CACCTGGGGC ATCAGCCTGA TCCTCATTCA ACTGGTGCGC
GTCACCTTCG GCGCGCAGAA CGTCGAGGTG GCCAACCCCG CCTGGCTGTC CGGCGGCGTG
CAGGTGCTGC CGAACCTGGT GCTGCCGTAC AACCGCATCG TCATCATCGG CTTCGCCCTG
TTCGTGGTGG CCCTGACCTG GCTGTTGCTG AACAAGACGC GCCTGGGCCT GAACGTGCGC
GCGGTGACGC AGAACCGCAA CATGGCCGCC TGCTGCGGCG TGCCCACCGG GCGCGTGGAC
ATGCTCGCCT TCGGCCTCGG TTCGGGCATC GCCGGCCTTG GCGGTGTGGC GCTGAGCCAG
ATCGGCAACG TCGGCCCGGA CCTCGGCCAG AGCTACATCA TCGACTCCTT CCTGGTGGTG
GTGCTCGGCG GCGTCGGCCA GCTGGCCGGT AGCGTGCTGG CGGCCTTCGG CCTGGGCGTG
GTGAACAAGT TCCTAGAGCC GCAGATCGGT GCGGTACTGG GCAAGATCCT CATCCTCGCG
CTGATCATTC TGTTTATCCA GAAACGCCCG CAAGGCCTCT TCGCTCTCAA AGGACGGGTG
ATCGACTGA
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| Protein sequence | MPTALTRILL SLLLWLPLAA QAGEADDFVA ANAGKQAKLL QDWAAAPNAE RLPLLQALQQ
GRVGSDADKR AFIEQSGTWQ AADGAAEANG TPRKLRLNNR LRGLLGVAMA SHQLLADDAA
ARLAAAKQLQ RNTPPALLPL LESRLSIEAD ETVRDAITLA LANLQLEASD PSVRLAAVER
LGRTGDPLAR TRLQSLLDGE ESDAAVRAAA EKSLAQVKNK LLIGELLGQA FSGLSLGSIL
LLAALGLAIT FGLLGVINMA HGEMLMLGAY TTYVVQLSFQ RLAPEYLTLY PLAALPIAFL
VTACIGMALE RTVIRHLYGR PLETLLATWG ISLILIQLVR VTFGAQNVEV ANPAWLSGGV
QVLPNLVLPY NRIVIIGFAL FVVALTWLLL NKTRLGLNVR AVTQNRNMAA CCGVPTGRVD
MLAFGLGSGI AGLGGVALSQ IGNVGPDLGQ SYIIDSFLVV VLGGVGQLAG SVLAAFGLGV
VNKFLEPQIG AVLGKILILA LIILFIQKRP QGLFALKGRV ID
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