| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0699 |
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| Symbol | |
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| ID | 5109029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 770610 |
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| End bp | 771701 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501912 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001186199 |
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| Protein GI | 146305734 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.813237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGC CACTCAATCA AACGCTACTG GCCCGCGCCA GCGCCAAGCT CGGCCCGCAG
GTTTCGCTGG CCATCGGCCT GCTGGTACTG GCCGTGCTGC TCGCCATGCC GCTGCTGCAC
CTGCTGCCGT CCGATCACGC CCTGCACGTC TCGGCCTACG CCCTGACGCT GGTGGGCAAG
ATCCTCTGCT ACGCCATCGT CGCCCTGGCG CTGGACCTGG TCTGGGGCTA CGCCGGCATG
CTGTCGCTGG GCCACGGCCT GTTCTTCGCC CTTGGCGGTT ATGCCATGGG CATGTACCTG
ATGCGCCAGT CGGCGGGCGA CGGGCTGCCG GCCTTTATGA GCTTCCTGGC CTGGAGCGAG
CTGCCCTGGT ACTGGTACGG CACCTCGAGT TTTCTCTGGG CGCTGTGCCT GGTGGTGCTG
GCGCCCGGCC TGCTGGCGCT GGCGTTCGGT TTCTTCGCCT TCCGCTCGCG GATCAAGGGC
GTGTACTTCT CGATCATGAC CCAGGCGCTG ACCTTTGCCG GCATGCTGCT GTTCTTCCGC
AATGAAACCG GCTTCGGCGG CAACAACGGC TTTACCGGTT TCACCCGTAT TCTCGGCTTC
GACATCACCG CGCAGGGCAC CCGCGCCGCG CTGTTCTTCG CCACCGTGGT GCTGCTGGTG
GGCAGCCTGT ACCTGGGCTT TCGCCTGGCG CGCAGCAAGT TCGGCCGGGT ACTGACCGCA
TTGCGCGACG CCGAGAACCG CCTGATGTTC TGCGGCTACG ATCCGCGCGG CTACAAGCTG
TTCATCTGGG TGCTCTCCGC GGTGCTGTGC GGCCTGGCCG GCGCGCTGTA CGTGCCCCAG
GTGGGCATCA TCAACCCCAG CGAGATGGCG CCGACCCAGT CCATCGAAGC CGCCGTGTGG
GTCGCCTTGG GCGGTCGCGG CACGCTGATC GGCCCGCTGC TCGGCGCCGG TATCGTCAAC
GGCATGAAGA GCTGGTTCAC CGTGGCCTTC CCGGAGTACT GGCTGTTCGC CCTGGGCGCG
CTGTTTATTG TTGTCACCCT CTTTCTCCCC AAGGGAGTGA TCGGCCTGCT GAAGAAGGAG
AAGGATCAAT GA
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| Protein sequence | MTMPLNQTLL ARASAKLGPQ VSLAIGLLVL AVLLAMPLLH LLPSDHALHV SAYALTLVGK
ILCYAIVALA LDLVWGYAGM LSLGHGLFFA LGGYAMGMYL MRQSAGDGLP AFMSFLAWSE
LPWYWYGTSS FLWALCLVVL APGLLALAFG FFAFRSRIKG VYFSIMTQAL TFAGMLLFFR
NETGFGGNNG FTGFTRILGF DITAQGTRAA LFFATVVLLV GSLYLGFRLA RSKFGRVLTA
LRDAENRLMF CGYDPRGYKL FIWVLSAVLC GLAGALYVPQ VGIINPSEMA PTQSIEAAVW
VALGGRGTLI GPLLGAGIVN GMKSWFTVAF PEYWLFALGA LFIVVTLFLP KGVIGLLKKE
KDQ
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