| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0696 |
|---|
| Symbol | |
|---|
| ID | 5109026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 767910 |
|---|
| End bp | 768746 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640501909 |
|---|
| Product | urease accessory protein UreD |
|---|
| Protein accession | YP_001186196 |
|---|
| Protein GI | 146305731 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0829] Urease accessory protein UreH |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTGC CTGCCGCCCT GTTCACGCCC AGCTGGCCCG CCGAGCTGGA GCTGGCTTAC
GCGCGCCACG GCGAACGCAC CACGCCGGTG CGCAGGCGCC ATCTTGGCCC TCTCCGGGTG
CAGAAACACC TCCACGCCGA GGGGCCGGAG GTGTGCCAGC ACATCATCGT CCACCCGCCC
GGCGGCATCG CCGGTGGCGA CCGCCTGGAC ATCTCGGCCC ATGCCGGCGA ACGCACCTGG
GTGCAGCTCA CCAGCCCCGG CGCAGCCAAG TGGTACCGCG CCGCCGGCGT CGCCCGCCAG
GATCTGCGCC TGCGCGTCGA GGCCGGCGCC ACCCTGGAAT GGCTGCCGCA GGAAACCATC
GTCTATGCCG GCGCCCAGGC CGAACTGCAC ACGCAGATCG AGCTGCACGG CGACGCCCGC
CTGTTCTACT GGGATATCGT CGCGCTAGGC CGCCCCGCCG CCGACGAGCG CTTTGCCAGC
GGCCATTTCC AGGCTGCGCT GGATGTTCGC CGTGACGGCA GGTTGCTGTG GCACGAGCGC
CAGCGCGTGA GCGGCGGCGA CGGCCTGCTC GACTCGCCCA TCGGCCTGAA CGGCCAGCCG
GTATTCGCCA CCCTGCTGGT CAGTGGCGAG GTGGACAACG AGCTGCTGGA GCGCTGTCGG
GAGGTGAACA TCGATGGCGT GCGCGGTGAT CTCAGCCAGC TCGCGGGCCT GCTGGTCGCG
CGCTGCCTGG CCAGCGAAGC ACTAAAGGCC CGCGCCTGGC TGATCGCCCT CTGGCGTCTG
CTGCGCCCTG CGCTGCTGGG GCGCGAGGCG GTGCCGCCGC GAATCTGGAG TACCTGA
|
|---|
| Protein sequence | MNLPAALFTP SWPAELELAY ARHGERTTPV RRRHLGPLRV QKHLHAEGPE VCQHIIVHPP
GGIAGGDRLD ISAHAGERTW VQLTSPGAAK WYRAAGVARQ DLRLRVEAGA TLEWLPQETI
VYAGAQAELH TQIELHGDAR LFYWDIVALG RPAADERFAS GHFQAALDVR RDGRLLWHER
QRVSGGDGLL DSPIGLNGQP VFATLLVSGE VDNELLERCR EVNIDGVRGD LSQLAGLLVA
RCLASEALKA RAWLIALWRL LRPALLGREA VPPRIWST
|
|---|
| |