| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0686 |
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| Symbol | |
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| ID | 5109016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 760066 |
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| End bp | 760989 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640501899 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001186186 |
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| Protein GI | 146305721 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGAA TCGCCTGCCT ATGCCATCTG CTGATCAGTG CTGCCGTTCT GTTGCCCGGC
GCCAGCTGGG CGCGTGACTG CATCGGCATG GTGCCAGCCG GCAGCTCCAC CTTCTGGAGC
GCGGTGGAGG CCGGTGCACG GCAAAGTGCC GACGAGCTGG AGCTGGACTT GTACACCCGT
GGCCTCAGTC ACGATGGCGA TGTGGAGGTG CAGTTGCAGC TCATCGAGCG GGTGGTGGCG
CGCGGCTGCA GGGGGCTGAT CATCGCCCCG ACCGGGCAGG CCATCGAGTT GCGCGTCGCG
GCCCTGCGCG CCCAAGGCAT CCCCACGGTG TACATCGATC GTGATATCGC CGGAGAAGGT
GCCTACGGCC TGGTCGCCAC CGACAATTTT CTCGCTGGGC AGCTGGCCGG GCAACAGCTG
GCCGAACTGC TGGGCGGTCG TGGCCGGGTC GCCCTGCTGC GCCTGCGCCA GGATCTGCAG
TCGACCCGCG AGCGCGAACG CGGCTTTCTG CTGGCGGCGC AGGCGGCCGG TCTGGAGGTG
GTCTTCGACG CCTATCTGGG CGATGACCGG GAAGGCATCG TCGCCGCCCT GAGCGAACAC
CTGCCCCGGC TCGATGGCCT GTTCAGCCCC AATGGCAGCA GCACTCGCGC GACCCTGGCG
GCCCTGCGCC AGCTGGGCAA GGCCGGACAG GTGCGCTTCG TCGGTTTCGA TGGCGGCGAT
CTGCTGTTCG ATGCCGTACG CCAGGGCGAG ATCCAGGCAT TGTTGCTGCA ACAGCCGCAG
GCCATCGGCG ATCATGCGGT GCGCCTGGTG CAGCGCGCCT TGCGTGGCGA ACCGGCTGCC
GCGCGTCTGC GCCTGCTGCT CGAGCCCCGC GTACTCACCG CCGACAAGCT GGCCGAGATG
GCCTCGCCAG AACAGCCTTG GTGA
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| Protein sequence | MPRIACLCHL LISAAVLLPG ASWARDCIGM VPAGSSTFWS AVEAGARQSA DELELDLYTR
GLSHDGDVEV QLQLIERVVA RGCRGLIIAP TGQAIELRVA ALRAQGIPTV YIDRDIAGEG
AYGLVATDNF LAGQLAGQQL AELLGGRGRV ALLRLRQDLQ STRERERGFL LAAQAAGLEV
VFDAYLGDDR EGIVAALSEH LPRLDGLFSP NGSSTRATLA ALRQLGKAGQ VRFVGFDGGD
LLFDAVRQGE IQALLLQQPQ AIGDHAVRLV QRALRGEPAA ARLRLLLEPR VLTADKLAEM
ASPEQPW
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