Gene Pmen_0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0682 
Symbol 
ID5109012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp756198 
End bp757463 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content67% 
IMG OID640501895 
Productmolecular chaperone-like protein 
Protein accessionYP_001186182 
Protein GI146305717 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.4345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCT CCACGCCTGC CCGCGCCTGC GGCATCGACT TCGGCACCTC CAACTCCACC 
GTCGGCTGGC TGCGCCCCGG CCAGGACAGC CTGCTGCCCC TGGAAGACGG CAAGATCACC
CTGCCCTCGG TGATTTTCTT CAACACCGAG GAGCGCCGCC CGGTCTATGG CCGCCTGGCC
CTGCACGAGT ATCTGGAAGG CTACGAAGGC CGCCTGATGC GCTCGCTGAA GAGCCTGCTG
GGCTCCAAGC TGCTGAAAAG CGAAACCACC GTGCTGGGCA GTGCCCTGCC GTTCAAGGAC
CTGCTCGGCT TCTTTATCGG CGAGCTGAAA AAACGTGCCG AAGCCCAGGC CGAACGCGCC
TTCGAGGAAG TGGTGCTGGG TCGCCCGGTG TTCTTCGTCG ATGACGACCC GGCGGCCGAC
CAGGAAGCGC AGAACACCCT GGTGGCCGTG GCGCACAAGC TCGGCTTCAA GGAGGTGTCG
TTCCAGTACG AGCCCATCGC CGCGGCCTTC GACTACGAGT CGAGCCTGGC GCGCGAGGAG
CTGGTGCTGA TCGTCGACAT CGGCGGCGGC ACCTCCGACT TCTCCCTGGT GCGTCTGGCC
CCTGAGCGCC ACCACCTGGC CGAACGTCAG GACGACATCC TCGCCACTGG CGGCGTGCAT
ATCGGCGGCA CCGACTTCGA CAAGCAGCTG TCGCTGGCCG GGGTGATGCC GCTGTTCGGC
TACGGCAGCC GGATGAAGAG CGACGCCTTC ATGCCCACCA GCTACCACCT CAACCTGGCC
ACCTGGCACA CCATCAACGC GCTGTACGCG CAGAAGACCC AGCTGGCCCT GCAGAACATG
CGTTACGACA TCGTCGACGC CACCGGTATC GACCGCCTGT TCGGCCTGAT CGAGCAGCGC
GCCGGGCACT GGCTGGCGAT GCAGGTGGAA GAGAGCAAGA TCGCCCTCAG CGAGCAGGAT
GCACGCCCCA TCGACCTGTC GCGCGTCGAG CCGGGCCTGG TCGCCGAGCT GACCCGGCCG
CTGTTCGAGA ACGCCATCGA GCCGCTGCTC GAGCGCATTC GCGCCAGCCT CACGCAGCTG
CTGGCCGACG CCGGCATCAC TGCCGAGCAG GTCGACACGC TGTTCTTCAC CGGTGGTTCC
AGCGGCGTAC CGGCGCTGCG CCAGAGCGTC GCGGCGATGC TGCCCAATGC GCGCAGCGTG
GAAGGCAACA CCTTCGGCAG CATCGGCAGC GGCCTGGCCA TCGAAGCGAA GAAGCGCTAC
GGCTGA
 
Protein sequence
MSFSTPARAC GIDFGTSNST VGWLRPGQDS LLPLEDGKIT LPSVIFFNTE ERRPVYGRLA 
LHEYLEGYEG RLMRSLKSLL GSKLLKSETT VLGSALPFKD LLGFFIGELK KRAEAQAERA
FEEVVLGRPV FFVDDDPAAD QEAQNTLVAV AHKLGFKEVS FQYEPIAAAF DYESSLAREE
LVLIVDIGGG TSDFSLVRLA PERHHLAERQ DDILATGGVH IGGTDFDKQL SLAGVMPLFG
YGSRMKSDAF MPTSYHLNLA TWHTINALYA QKTQLALQNM RYDIVDATGI DRLFGLIEQR
AGHWLAMQVE ESKIALSEQD ARPIDLSRVE PGLVAELTRP LFENAIEPLL ERIRASLTQL
LADAGITAEQ VDTLFFTGGS SGVPALRQSV AAMLPNARSV EGNTFGSIGS GLAIEAKKRY
G