| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0673 |
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| Symbol | |
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| ID | 5109003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 747169 |
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| End bp | 747675 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640501886 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001186173 |
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| Protein GI | 146305708 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.27655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGG GCATTCGAGT TTTCGTCCGG GTCGTGGACG CATTCAACCG GAGGGTCGGG
CGTTTCGCCA TGTACCTGAT CTTCGCCATG CTGGCGGTGC TCCTGTACTC CTCGATCAGC
AAGACCTTCT TCACCCCGTC GATCTGGACC CTGGAAAGCG CCCAGTTCCT CATGGTCGCC
TACTTCCTGC TCGGCGGCGC CTACTCGATG CAGCTCGACG CCCATGTGCG CATGGACCTC
GCTTACAGCC ACTGGTCGCC GCGCACCCGC GCCGTCGTCG ATGCCATCAC CGTGTTCATG
CTGATCTTCT ATCTGGTGAT GCTGCTGATC GGCGGCATCT CCTCCACCGA ATACGCCATC
GAATACAAGG AGACCAGCTA TTCGGCCTGG TCGCCCTACA TGGCGCCGAT CAAGATCGTC
ATGTGCTTCG GCATCGCCCT GATGCTGCTG CAGGCCATCG CCACCTTCTT CAAGGATTTC
TACGCCGCCC GTGGGGAGAC CCTGTGA
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| Protein sequence | MRKGIRVFVR VVDAFNRRVG RFAMYLIFAM LAVLLYSSIS KTFFTPSIWT LESAQFLMVA
YFLLGGAYSM QLDAHVRMDL AYSHWSPRTR AVVDAITVFM LIFYLVMLLI GGISSTEYAI
EYKETSYSAW SPYMAPIKIV MCFGIALMLL QAIATFFKDF YAARGETL
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