Gene Pmen_0665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0665 
Symbol 
ID5108995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp739927 
End bp740601 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content70% 
IMG OID640501878 
Producturease accessory protein UreF 
Protein accessionYP_001186165 
Protein GI146305700 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.675417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0233838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGG CCTGGGCCCT GTTGCGCCTG GCCAGCCCGC AGCTACCCAT CGGCGGTTAC 
AGCTACTCGC AAGGCCTGGA GTGGGCCATC GACAGCGGCC TGATCCAGGA TGCCGACGCC
GCCGAACGCT GGCTGGCCGA TCAGTTGACG CTCAACCTCG CCCGCTTCGA AGCGCCGCTG
CTGCTGGCAC ATTGTCGCGC CGCGCACGAG GGCAACTGGC CGCACCTGCA GGAACTGGCC
GAACGGCACC GCGCCAGCCG CGAAACCCGC GAGCTGGCTC TGGAAAGCCG GCAGATGGGC
TACTCGCTGC GGCAACTGCT CGAAGGCCTG CCCGAGCTGG ACGAAGCCGC ACGTGAACTG
CTCGCAAGCC ATCACGAACC GGGTCTGGCC CTGGCCTGGG CGCTGGCCGC ACGCGCCTGG
CAGATCACCC CGGACGATGC CCTGGCCGCC TGGCTCTGGG GCTGGCTGGA AAATCAGCTG
GCCGTACTGA TGAAGGTGCT GCCGCTGGGC CAGCAGGCCG CCCAGCGCCT GACCAGCCGT
CTGCTGCCAA CGCTCGAGGC CGCCCAGCAG CAGGCCGCCA GCCTTTCCCC CGAACACTGG
GGCAGCGCCG CCTTCGGCCT GGCCCTGGCG AGCATGGCGC ACGAGCGCCA GTACTCGCGT
CTCTTCCGCT CCTGA
 
Protein sequence
MKPAWALLRL ASPQLPIGGY SYSQGLEWAI DSGLIQDADA AERWLADQLT LNLARFEAPL 
LLAHCRAAHE GNWPHLQELA ERHRASRETR ELALESRQMG YSLRQLLEGL PELDEAAREL
LASHHEPGLA LAWALAARAW QITPDDALAA WLWGWLENQL AVLMKVLPLG QQAAQRLTSR
LLPTLEAAQQ QAASLSPEHW GSAAFGLALA SMAHERQYSR LFRS