Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0665 |
Symbol | |
ID | 5108995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 739927 |
End bp | 740601 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640501878 |
Product | urease accessory protein UreF |
Protein accession | YP_001186165 |
Protein GI | 146305700 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0830] Urease accessory protein UreF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.675417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0233838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGG CCTGGGCCCT GTTGCGCCTG GCCAGCCCGC AGCTACCCAT CGGCGGTTAC AGCTACTCGC AAGGCCTGGA GTGGGCCATC GACAGCGGCC TGATCCAGGA TGCCGACGCC GCCGAACGCT GGCTGGCCGA TCAGTTGACG CTCAACCTCG CCCGCTTCGA AGCGCCGCTG CTGCTGGCAC ATTGTCGCGC CGCGCACGAG GGCAACTGGC CGCACCTGCA GGAACTGGCC GAACGGCACC GCGCCAGCCG CGAAACCCGC GAGCTGGCTC TGGAAAGCCG GCAGATGGGC TACTCGCTGC GGCAACTGCT CGAAGGCCTG CCCGAGCTGG ACGAAGCCGC ACGTGAACTG CTCGCAAGCC ATCACGAACC GGGTCTGGCC CTGGCCTGGG CGCTGGCCGC ACGCGCCTGG CAGATCACCC CGGACGATGC CCTGGCCGCC TGGCTCTGGG GCTGGCTGGA AAATCAGCTG GCCGTACTGA TGAAGGTGCT GCCGCTGGGC CAGCAGGCCG CCCAGCGCCT GACCAGCCGT CTGCTGCCAA CGCTCGAGGC CGCCCAGCAG CAGGCCGCCA GCCTTTCCCC CGAACACTGG GGCAGCGCCG CCTTCGGCCT GGCCCTGGCG AGCATGGCGC ACGAGCGCCA GTACTCGCGT CTCTTCCGCT CCTGA
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Protein sequence | MKPAWALLRL ASPQLPIGGY SYSQGLEWAI DSGLIQDADA AERWLADQLT LNLARFEAPL LLAHCRAAHE GNWPHLQELA ERHRASRETR ELALESRQMG YSLRQLLEGL PELDEAAREL LASHHEPGLA LAWALAARAW QITPDDALAA WLWGWLENQL AVLMKVLPLG QQAAQRLTSR LLPTLEAAQQ QAASLSPEHW GSAAFGLALA SMAHERQYSR LFRS
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