Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0662 |
Symbol | |
ID | 5108992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 737645 |
End bp | 738559 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640501875 |
Product | glycerophosphodiester phosphodiesterase |
Protein accession | YP_001186162 |
Protein GI | 146305697 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0956645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.017312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGCT TCGCCCGCTT CCTGCTCGCC CCCCTGCTGC TGCTCGCCAT CGCCCTGCTG GTGCTGGCGC TGACCAGCCG CCCGGCCACG GTGCCCGAAG TGCTGGCCGA CCTGGGCGAG CGCCCGCTGG TGATCGCCCA TCGCGGCGGC AAGGGGCTGT GGCCGGAGAA CACCCTGTTC GCCTTCGAGC GCGCGGTGGC ACTCGGCGTC GACATGCTGG AAATGGACCT GCACCTGAGC CAGGACGCCG AGCTGGTGGT CATCCATGAC GATACCCTCG AGCGCACCAC CAATGGCCGA GGCCCGGTGG CCCATTACAG CCTGGCCGAA CTGCAGGCGC TCGACGCCGG CTACCACTGG ACGGCCGATG GCGGCCAGAG CTATCCCTAC CGCGGCCAGG GCACCCGCAT CGCCAGCCTG CGCGAGGTGC TGGAACGGTT TCCCCTGATA CCCAAGGTGG TCGAGATCAA GGTCCCCGAT GTGGGCATGG AAGCGTTGCT GTGCGAAACC CTGGCCAGCT ACGACCAGCT CGACCGGGTG CTGGTCGGCA GCTTTCACGA ACGCAGCCTG AAACGCTTCC GCGAACTCTG TCCGGAAGTC GCCACCTCCG CCGGACCGGT TTCGGTGCGC CTGCTGCTGG CACTGAACTG GCTGGGCCTG AGCGATCTGC TGTCGCCCTC CTACCCGGTG CTGCAGATTC CGCCCCAACA CAGCGGCCTG ACCCTGGCCA CCCCGCGCCT GCTGCGCAAT GCCCAGGCGC GCGGCCTGCA CGTGCAGCTG TGGACGATCA ACGAGCAGCC CGACATGCGA CGGCTGCTGG AAATGGGCGC CAACGGCCTG ATCACCGACT ATCCGGACCG CGCCCTGCAA CTGCTCGGCC GCTCCACGCA GCTTGGCGCG CTGGAGCCAC GATGA
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Protein sequence | MLRFARFLLA PLLLLAIALL VLALTSRPAT VPEVLADLGE RPLVIAHRGG KGLWPENTLF AFERAVALGV DMLEMDLHLS QDAELVVIHD DTLERTTNGR GPVAHYSLAE LQALDAGYHW TADGGQSYPY RGQGTRIASL REVLERFPLI PKVVEIKVPD VGMEALLCET LASYDQLDRV LVGSFHERSL KRFRELCPEV ATSAGPVSVR LLLALNWLGL SDLLSPSYPV LQIPPQHSGL TLATPRLLRN AQARGLHVQL WTINEQPDMR RLLEMGANGL ITDYPDRALQ LLGRSTQLGA LEPR
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