| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0657 |
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| Symbol | |
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| ID | 5108987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 732913 |
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| End bp | 733806 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640501870 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_001186157 |
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| Protein GI | 146305692 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00013619 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAGTG CGCTGTATCA GGTTCTCCAC GACACCCACT ACCGCTACTC GGCGCCGGTT
TCCCTGGCGC AGCAGCTGGC GCACCTGTGG CCGCGCGACT GCCCCTGGCA GCGTTGCCAC
GAGCAGGAGC TGCGCATCGA CCCGCAACCC TGCCAGCGCC GCGACGGTCT GGATGTGTTC
GGCAACCCGC TGACCCGCCT GGTGTTCGAG CGCCCCCATG AGCAGCTCAG CGTCAGCGCG
CGCTTGCGTG TCGAGGTGCT GGCGCGCGCG CCGCTGGATC TGGATGATTC GCCGAGCTGG
GAATCGGCCT GCGCGGCGCT CAGCTATGGC GGCCGGCCCA TGGCGCCGGC GCTGCTGGAG
GCGGCGCGCT ACCGTTTCGA ATCGCCCTAC GTGCGCCTCA AGCAGGTCTT CGCCGAGTAC
GCCGATGACT GTTTCACGCC GGGCCGTCCC CTGCTGCAGG CCGGTCAGGC ACTGATGCAG
AAGATTTTCG AGGAGTTCAG CTTCGATGCC GGCGCCACCC AGGTGGCCAC ACCCTTGCTG
CAGGTGCTGG AGGAAAAGCG CGGCGTCTGC CAGGACTTCG CCCACCTGAT GTTGGCCTGC
CTGCGTTCGC GCGGTCTGGC GGCGCGCTAC GTCAGCGGCT ATCTGCTGAC CCAGCCGCCG
CCCGGCCAGC CGCGGCTGAT CGGCGCCGAC GCGTCGCATG CCTGGGTATC GCTGTACTGT
CCGCGGCAGG GCTGGGTGGA TTTCGACCCG ACCAACAACG TGCGCCCGGC GCTGGAGCAC
ATCACCCTGG CCTGGGGCCG GGATTTCTCC GATGTGTCGC CGCTGCGTGG GGTGATTCTG
GGAGGCGGCA GCCACGACCC GGAAGTGCAG GTCACGGTGC TGCCGCTGGG ATAG
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| Protein sequence | MSSALYQVLH DTHYRYSAPV SLAQQLAHLW PRDCPWQRCH EQELRIDPQP CQRRDGLDVF
GNPLTRLVFE RPHEQLSVSA RLRVEVLARA PLDLDDSPSW ESACAALSYG GRPMAPALLE
AARYRFESPY VRLKQVFAEY ADDCFTPGRP LLQAGQALMQ KIFEEFSFDA GATQVATPLL
QVLEEKRGVC QDFAHLMLAC LRSRGLAARY VSGYLLTQPP PGQPRLIGAD ASHAWVSLYC
PRQGWVDFDP TNNVRPALEH ITLAWGRDFS DVSPLRGVIL GGGSHDPEVQ VTVLPLG
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