| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0650 |
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| Symbol | |
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| ID | 5108980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 718895 |
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| End bp | 719971 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501863 |
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| Product | alanine racemase |
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| Protein accession | YP_001186150 |
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| Protein GI | 146305685 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0000416834 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTCCGC TTGCCGCCAT CGTCGATCTC TCCGCCATCG CCCACAACTA CGCCGTAGCC
AAGCGCTGCG CGCCGGGACG CCAGGCGTTC GCGGTGGTCA AGGCCAATGC CTACGGGCAT
GGCGTACGCG AGGTGGTCAC CGCGTTGCAC GAGGTAGCCG ACGGCTTTGC CGTGGCCAGC
CTGGAGGAAG CCGCCGAGGT GCGCGCCATG CACGGCGAAG CGCGCATCCT GCTGCTCGAG
GGCTGCTTCG AGGCCAGCGA GTACGCCATC GCCGCGCAGC TTGGCCTGGA TCTGGTGGTG
CAGAGCGCGG CGCAGGCCGA CGCGTTGCTC GCCTGTGAGC CGGCGCGCCC GCTCAACGTC
TGGCTCAAGC TGGACTCCGG CATGCATCGC CTGGGTTTCG ACGCGGCCAG TCTGCGCCAG
TGGCATGCAC GGCTCGAGAT GGCAGAGCAG GTGGCCGAGC TCAATCTGCT CAGCCACTTC
GCCTGCGCCG ACGAGCGCGG TCATCCGCTC ACGGAGCTAC AGGTCGAACG CTTTCTCGAT
CTGCTGGATC TGGATTTCAA TCATCGCTCG CTGGCCAACT CGGCGGCGGT ACTGACCATT
CCGGCCGCCC ACATGGACTG GCTGCGCCCC GGCATCATGC TCTACGGCGC CACGCCTTTC
GCCGACTTCA GCGCGCGCGA GCTTGGCCTG AAGCCGGCCA TGACCCTGGC GGCGCGGGTG
ATCGCCGTGC GCCAGGTGGC GGTCGGAGAA AGTGTCGGTT ACGGCGCGAC CTGGGTAGCC
GAGCGGCCCT CGCGTATCGC CACGGTCAGT TGCGGCTATG CCGACGGTTA TCCGCGCCAC
GCGCCCAGCG GCACACCGGT GCTGGTCGAC GGGCAGCGCG CGCCGTTGGC CGGCAGAGTA
TCGATGGACA TGCTGACGGT GGATATCACC GACCTGCCCG AGGTGGGTAT CGATTCGTCG
GTGGAGCTGT GGGGCGCGCA ACTGCCGGTG GACGAGGTGG CGCATGCCAG CGGCACCATC
GGCTACGAGC TGCTGACCAA GGTCACCGCG CGCGTGCCGC GGCGCTATAT CGGCTAG
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| Protein sequence | MRPLAAIVDL SAIAHNYAVA KRCAPGRQAF AVVKANAYGH GVREVVTALH EVADGFAVAS
LEEAAEVRAM HGEARILLLE GCFEASEYAI AAQLGLDLVV QSAAQADALL ACEPARPLNV
WLKLDSGMHR LGFDAASLRQ WHARLEMAEQ VAELNLLSHF ACADERGHPL TELQVERFLD
LLDLDFNHRS LANSAAVLTI PAAHMDWLRP GIMLYGATPF ADFSARELGL KPAMTLAARV
IAVRQVAVGE SVGYGATWVA ERPSRIATVS CGYADGYPRH APSGTPVLVD GQRAPLAGRV
SMDMLTVDIT DLPEVGIDSS VELWGAQLPV DEVAHASGTI GYELLTKVTA RVPRRYIG
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