Gene Pmen_0648 details

Gene Information

• Locus tag: Pmen_0648
• Symbol: rplI
• ID: 5109610
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas mendocina ymp
• Kingdom: Bacteria
• Replicon accession: NC_009439
• Strand: +
• Start bp: 716857
• End bp: 717303
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640501861
• Product: 50S ribosomal protein L9
• Protein accession: YP_001186148
• Protein GI: 146305683
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0359] Ribosomal protein L9
• TIGRFAM ID: [TIGR00158] ribosomal protein L9

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.000594391
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGAAGTCA TCCTGCTGGA AAAAATCGCC AATCTGGGCA ACCTGGGCGA CAAAGTGAAC 
GTCAAGGCCG GTTACGGCCG TAACTTCCTG CTGCCGCAGG GCAAGGCCAC CGCTGCTACC 
GCTGAAAACG TAGCTGCGTT CGAAGCCCGC CGCGCCGAGC TGGAAAAACT GGCTGCCGAG 
AAGAAAGCTT CCGCCGAAGC TCGCGCTGCC CAACTGGCTG AGCTGGAAGT CACCATCACC 
GCCACCGCTG GCGATGAAGG CAAGCTGTTC GGTTCGATCG GTACCCACGA CATCGCTGAC 
GCCCTGACCG CCTCCGGCGT TGAAGTGGCC AAGGCCGAAG TTCGTCTGCC CAACGGTACT 
ATCCGTCAGG TCGGCGAGTA CGACGTTGCA CTGCACCTGC ACACCGACGT CGAAGCCACC 
GTCAAGGTGA TCGTGGTCGC TGCCTGA 

 

Protein sequence

MEVILLEKIA NLGNLGDKVN VKAGYGRNFL LPQGKATAAT AENVAAFEAR RAELEKLAAE 
KKASAEARAA QLAELEVTIT ATAGDEGKLF GSIGTHDIAD ALTASGVEVA KAEVRLPNGT 
IRQVGEYDVA LHLHTDVEAT VKVIVVAA