| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0646 |
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| Symbol | rpsR |
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| ID | 5109608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 715675 |
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| End bp | 715905 |
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| Gene Length | 231 bp |
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| Protein Length | 76 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640501859 |
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| Product | 30S ribosomal protein S18 |
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| Protein accession | YP_001186146 |
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| Protein GI | 146305681 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.934429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.000938781 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCACGTT TCTTCCGTCG TCGTAAATTC TGCCGCTTCA CCGCTGAAGA CGTGAAAGAG
ATCGATTTCA AAGATCTCAA CACCCTGAAA GCCTACATCT CGGAAACCGG CAAGATCGTT
CCCAGCCGTA TCACCGGTAC CAAGGCTCGT TATCAGCGTC AGCTGGCCAC CGCTATCAAG
CGCGCCCGCT TCCTGGCCCT GCTGCCCTAC ACCGACAGCC ACGGCCGCTG A
|
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| Protein sequence | MARFFRRRKF CRFTAEDVKE IDFKDLNTLK AYISETGKIV PSRITGTKAR YQRQLATAIK
RARFLALLPY TDSHGR
|
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