Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0645 |
Symbol | rpsF |
ID | 5109607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 715224 |
End bp | 715646 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640501858 |
Product | 30S ribosomal protein S6 |
Protein accession | YP_001186145 |
Protein GI | 146305680 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0360] Ribosomal protein S6 |
TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.793975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.000526957 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTCATT ACGAAATCAT CTTCCTGGTT CACCCGGACC AGAGCGAGCA AGTCGGCGGC ATGGTCGAGC GTTACACCAA GCTGATCGAA GAAGACGGTG GCAAGATTCA CCGCCTGGAA GACTGGGGCC GTCGTCAGCT GGCTTACGCC ATCAACAACG TCCACAAAGC CCACTACGTG ATGCTCAACG TAGAGTGCAC CGGCAAGGCC CTGGCCGAGC TGGAAGACAA CTTCCGCTAC AACGACGCCG TGATCCGTAA CCTGGTCATC CGTCGCGACG AGGCCGTCAC TGGCCAGTCC GAGATGCTGA AGGCCGAAGA AAACCGCAGT GAGCGCCGCG AGCGTCGTGA ACGTCCTGAA AACGCCGAGT CCAACGACGG CGATGACAGC GACAGCAACG ACAGCGACAA CGCTGACGAG TAA
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Protein sequence | MRHYEIIFLV HPDQSEQVGG MVERYTKLIE EDGGKIHRLE DWGRRQLAYA INNVHKAHYV MLNVECTGKA LAELEDNFRY NDAVIRNLVI RRDEAVTGQS EMLKAEENRS ERRERRERPE NAESNDGDDS DSNDSDNADE
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