| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0638 |
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| Symbol | |
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| ID | 5109600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 705322 |
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| End bp | 706191 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640501849 |
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| Product | HflC protein |
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| Protein accession | YP_001186138 |
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| Protein GI | 146305673 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0112821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA AGTCCCTGAT CGGCCTGATC GTGGCCGTGG TTCTGGCCCT GGTGGCGTGG
AACAGTTTCT ACATCGTGGC GCAGACCGAG CGCGCGGTCA TGCTGCAGTT CGGTCGTGTG
GTCAATCCCG ATGTGCCGCC TGGTCTGCAT GTGAAGATTC CTTACGTCAA CCAGGTGCGC
ATCTTCGATG GTCGCCTGCT GACGCTGGAT TCGACCTCCT CGCGCTTCCT GACCCTGGAG
AAGAAGGCGC TGATGGTCGA CGCCTACGCC AAGTGGCGGG TGAAGGATGC CGAGCGTTTC
TATCAGTCCA CCTCCGGCAT GAAGCAGGTC GCCGACGAGC GCCTGGCGCG TCGTCTGGAA
GCCTCGCTGC GTGACCAGTT CGGTAAGCGC ACCCTGCACG AGTCGGTGTC CGGCGAGCGT
GATGCGCTGA TGGCCGACGT GACCGCGACC CTCAATCGCG CCGCCGAGCG TGAACTGGGT
ATCGAGGTGG TCGACGTGCG GGTCAAGGCC ATCGACCTGC CGCGTGAAGT GAACCGCAGC
GTGTTCGAGC GCATGAGCAC CGAGCGTGAG CGTGAGGCGC GCGAGCACCG CGCCAAGGGG
CGTGAGCTGG CCGAAGGTAT CCGCGCCGAT GCCGACCGTC AGCGCCGCGT ACTGCTGGCC
GAAGCCTACC GTGAAGCCGA AGAGCTGCGC GGTGACGGTG ATGCCCAGGC TGCCGCCATT
TACGCCCGTG CCTTCGGCCA GGATCAGGAG TTCTACTCCT TCTACCGCAG CCTGCAGGCC
TACCGCGAAA GCTTCGCGGA CAAGCGCGAC GTGCTGGTGC TGGACCCGGG CAGCGATTTC
TTCCGCTACC TGGAGAAATC CAAGCCTTAA
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| Protein sequence | MSNKSLIGLI VAVVLALVAW NSFYIVAQTE RAVMLQFGRV VNPDVPPGLH VKIPYVNQVR
IFDGRLLTLD STSSRFLTLE KKALMVDAYA KWRVKDAERF YQSTSGMKQV ADERLARRLE
ASLRDQFGKR TLHESVSGER DALMADVTAT LNRAAERELG IEVVDVRVKA IDLPREVNRS
VFERMSTERE REAREHRAKG RELAEGIRAD ADRQRRVLLA EAYREAEELR GDGDAQAAAI
YARAFGQDQE FYSFYRSLQA YRESFADKRD VLVLDPGSDF FRYLEKSKP
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