Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0633 |
Symbol | mutL |
ID | 5109595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 699534 |
End bp | 701405 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640501844 |
Product | DNA mismatch repair protein |
Protein accession | YP_001186133 |
Protein GI | 146305668 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.211888 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGTA TTCATCTGCT CAGCCCGCGT CTGGCCAACC AGATCGCCGC GGGCGAAGTG GTCGAGCGTC CGGCTTCGGT AGCCAAGGAA CTGCTGGAAA ACAGCCTGGA CTCCGGTGCG CGGCGCATCG ACGTGGAGGT CGAACAGGGT GGCGTCAAGC TGCTCAAGGT GCGTGACGAC GGCGGTGGTA TCGCCGCCGA CGACCTGCCG CTGGCCCTGG CGCGCCACGC CACCAGCAAG ATTCGTGAGC TGGAAGACCT CGAAGCCGTG CTCAGCATGG GCTTTCGCGG CGAGGCGCTG GCCTCGATCA GCTCGGTGTC GCGCCTGACC CTGACCTCGC GCACCGCCGA TGCCGATCAG GCCTGGCAGG TGGAAACCGA AGGGCGCGAC ATGCAGCCGC GGGTGCAGCC TGCGGCGCAT CCGGTCGGCA CCTCGGTGGA AGTGCGTGAC CTGTTCTTCA ATACTCCGGC GCGGCGCAAG TTCCTGCGCG CCGAGAAGAC CGAATTCGAT CACCTGCAGG AAGTGATCAA GCGCCTGGCG CTGGCGCGTT TCGACGTGGC CTTCCACCTG CGGCACAACG GCAAGACGGT GTTCGCCCTG CACGAGGCCG GCGACGAGAT CAGTCGCGCG CGCCGCGTCG CCGCCGTGTG TGGTCCGGCT TTCCTCGAAC AGGCGCTGCC CATCGAGATC GAGCGCGGCG GCCTGCGGTT GTGGGGCTGG GTCGGCCTGC CGACCTTCTC GCGCAGCCAG GCCGATCTGC AGTACTTCTA CGTCAACGGC CGCATGGTGC GTGACAAGCT GGTGGCCCAC GCGGTGCGCC AGGCCTATCG CGACGTGCTG TTCAACGGCC GCCATCCGAC CTTCGTGCTG TTCCTGGAGA TCGACCCGAG CACGGTGGAC GTCAACGTGC ACCCGACCAA GCACGAGGTG CGTTTCCGCG ACAGCCGCAT GGTCCATGAC TTCCTCTACG GCACCCTGCA TCGTGCCTTG GCCGATGTGC GCCCGGAGGA TCAGGTCGCG GCGCCGGCGG CGGTCATGCC CATGGTGCGA GCCACGGGGC TGGCGGCGGG CGAATTCGGC CCGCAGGGGG AAATGGGCCT GGCCGCCAGC GTGCTGGAAA CGCCCGTGGC CAACCCGCAG CCGGCCTGGC GTGGCGCCGG GGCTGGTTAT CAGCAGCCGG CCGGCAGTCC CGGGGTTCCG GTCGCCGAAG CGCAGGCGGC CTATCGCGAA TACTTCGCGC CGCTGCCAGG GGCGCAGCCC GCACCGCTGC CACAGGAGCA GGGCGACATT CCGCCGCTCG GTTATGCGGT GGCGCAGCTC AAGGGCGTCT ATATCCTCGC CGAGAATGCC CAGGGCATGG TGGTGGTGGA CATGCACGCG GCGCACGAGC GCATCACCTA CGAACGCCTG AAGCAGGCCA TGGCCAGCGA AGGCCTGCGC GGTCAGCCGC TGCTGGTGCC CGAGTCCATC GCCCTCAGTC AGCGCGAGGC CGACTGCGCC GAAGAGCACG GGGAATGGTT CCAGCGCCTG GGCTTCGAAT TGCAGCGCCT GGGTGAGGAA ACCGTGGCGA TTCGCCAGAT TCCGGCCCTG CTCAAGCAGG CCGAGGCCAC CCAGTTGGTG CGCGACGTGC TGGCCGATCT GCTCGAATAC GGCACCAGCG ACCGCATTCA GGCCCATCTC AACGAGCTGC TGGCGACCAT GGCCTGCCAC GGCGCGGTGC GCGCCAACCG GCGTCTGACC CTCCCCGAGA TGAATGCGCT GCTGCGTGAC ATGGAGCAGA CCGAGCGCAG CGGCCAGTGC AACCACGGTC GTCCGACCTG GACCCAGCTG GGCATGGACG ATCTCGACAA GCTGTTCCTG CGAGGTCGCT GA
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Protein sequence | MSRIHLLSPR LANQIAAGEV VERPASVAKE LLENSLDSGA RRIDVEVEQG GVKLLKVRDD GGGIAADDLP LALARHATSK IRELEDLEAV LSMGFRGEAL ASISSVSRLT LTSRTADADQ AWQVETEGRD MQPRVQPAAH PVGTSVEVRD LFFNTPARRK FLRAEKTEFD HLQEVIKRLA LARFDVAFHL RHNGKTVFAL HEAGDEISRA RRVAAVCGPA FLEQALPIEI ERGGLRLWGW VGLPTFSRSQ ADLQYFYVNG RMVRDKLVAH AVRQAYRDVL FNGRHPTFVL FLEIDPSTVD VNVHPTKHEV RFRDSRMVHD FLYGTLHRAL ADVRPEDQVA APAAVMPMVR ATGLAAGEFG PQGEMGLAAS VLETPVANPQ PAWRGAGAGY QQPAGSPGVP VAEAQAAYRE YFAPLPGAQP APLPQEQGDI PPLGYAVAQL KGVYILAENA QGMVVVDMHA AHERITYERL KQAMASEGLR GQPLLVPESI ALSQREADCA EEHGEWFQRL GFELQRLGEE TVAIRQIPAL LKQAEATQLV RDVLADLLEY GTSDRIQAHL NELLATMACH GAVRANRRLT LPEMNALLRD MEQTERSGQC NHGRPTWTQL GMDDLDKLFL RGR
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