Gene Pmen_0633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0633 
SymbolmutL 
ID5109595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp699534 
End bp701405 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content68% 
IMG OID640501844 
ProductDNA mismatch repair protein 
Protein accessionYP_001186133 
Protein GI146305668 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.211888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTA TTCATCTGCT CAGCCCGCGT CTGGCCAACC AGATCGCCGC GGGCGAAGTG 
GTCGAGCGTC CGGCTTCGGT AGCCAAGGAA CTGCTGGAAA ACAGCCTGGA CTCCGGTGCG
CGGCGCATCG ACGTGGAGGT CGAACAGGGT GGCGTCAAGC TGCTCAAGGT GCGTGACGAC
GGCGGTGGTA TCGCCGCCGA CGACCTGCCG CTGGCCCTGG CGCGCCACGC CACCAGCAAG
ATTCGTGAGC TGGAAGACCT CGAAGCCGTG CTCAGCATGG GCTTTCGCGG CGAGGCGCTG
GCCTCGATCA GCTCGGTGTC GCGCCTGACC CTGACCTCGC GCACCGCCGA TGCCGATCAG
GCCTGGCAGG TGGAAACCGA AGGGCGCGAC ATGCAGCCGC GGGTGCAGCC TGCGGCGCAT
CCGGTCGGCA CCTCGGTGGA AGTGCGTGAC CTGTTCTTCA ATACTCCGGC GCGGCGCAAG
TTCCTGCGCG CCGAGAAGAC CGAATTCGAT CACCTGCAGG AAGTGATCAA GCGCCTGGCG
CTGGCGCGTT TCGACGTGGC CTTCCACCTG CGGCACAACG GCAAGACGGT GTTCGCCCTG
CACGAGGCCG GCGACGAGAT CAGTCGCGCG CGCCGCGTCG CCGCCGTGTG TGGTCCGGCT
TTCCTCGAAC AGGCGCTGCC CATCGAGATC GAGCGCGGCG GCCTGCGGTT GTGGGGCTGG
GTCGGCCTGC CGACCTTCTC GCGCAGCCAG GCCGATCTGC AGTACTTCTA CGTCAACGGC
CGCATGGTGC GTGACAAGCT GGTGGCCCAC GCGGTGCGCC AGGCCTATCG CGACGTGCTG
TTCAACGGCC GCCATCCGAC CTTCGTGCTG TTCCTGGAGA TCGACCCGAG CACGGTGGAC
GTCAACGTGC ACCCGACCAA GCACGAGGTG CGTTTCCGCG ACAGCCGCAT GGTCCATGAC
TTCCTCTACG GCACCCTGCA TCGTGCCTTG GCCGATGTGC GCCCGGAGGA TCAGGTCGCG
GCGCCGGCGG CGGTCATGCC CATGGTGCGA GCCACGGGGC TGGCGGCGGG CGAATTCGGC
CCGCAGGGGG AAATGGGCCT GGCCGCCAGC GTGCTGGAAA CGCCCGTGGC CAACCCGCAG
CCGGCCTGGC GTGGCGCCGG GGCTGGTTAT CAGCAGCCGG CCGGCAGTCC CGGGGTTCCG
GTCGCCGAAG CGCAGGCGGC CTATCGCGAA TACTTCGCGC CGCTGCCAGG GGCGCAGCCC
GCACCGCTGC CACAGGAGCA GGGCGACATT CCGCCGCTCG GTTATGCGGT GGCGCAGCTC
AAGGGCGTCT ATATCCTCGC CGAGAATGCC CAGGGCATGG TGGTGGTGGA CATGCACGCG
GCGCACGAGC GCATCACCTA CGAACGCCTG AAGCAGGCCA TGGCCAGCGA AGGCCTGCGC
GGTCAGCCGC TGCTGGTGCC CGAGTCCATC GCCCTCAGTC AGCGCGAGGC CGACTGCGCC
GAAGAGCACG GGGAATGGTT CCAGCGCCTG GGCTTCGAAT TGCAGCGCCT GGGTGAGGAA
ACCGTGGCGA TTCGCCAGAT TCCGGCCCTG CTCAAGCAGG CCGAGGCCAC CCAGTTGGTG
CGCGACGTGC TGGCCGATCT GCTCGAATAC GGCACCAGCG ACCGCATTCA GGCCCATCTC
AACGAGCTGC TGGCGACCAT GGCCTGCCAC GGCGCGGTGC GCGCCAACCG GCGTCTGACC
CTCCCCGAGA TGAATGCGCT GCTGCGTGAC ATGGAGCAGA CCGAGCGCAG CGGCCAGTGC
AACCACGGTC GTCCGACCTG GACCCAGCTG GGCATGGACG ATCTCGACAA GCTGTTCCTG
CGAGGTCGCT GA
 
Protein sequence
MSRIHLLSPR LANQIAAGEV VERPASVAKE LLENSLDSGA RRIDVEVEQG GVKLLKVRDD 
GGGIAADDLP LALARHATSK IRELEDLEAV LSMGFRGEAL ASISSVSRLT LTSRTADADQ
AWQVETEGRD MQPRVQPAAH PVGTSVEVRD LFFNTPARRK FLRAEKTEFD HLQEVIKRLA
LARFDVAFHL RHNGKTVFAL HEAGDEISRA RRVAAVCGPA FLEQALPIEI ERGGLRLWGW
VGLPTFSRSQ ADLQYFYVNG RMVRDKLVAH AVRQAYRDVL FNGRHPTFVL FLEIDPSTVD
VNVHPTKHEV RFRDSRMVHD FLYGTLHRAL ADVRPEDQVA APAAVMPMVR ATGLAAGEFG
PQGEMGLAAS VLETPVANPQ PAWRGAGAGY QQPAGSPGVP VAEAQAAYRE YFAPLPGAQP
APLPQEQGDI PPLGYAVAQL KGVYILAENA QGMVVVDMHA AHERITYERL KQAMASEGLR
GQPLLVPESI ALSQREADCA EEHGEWFQRL GFELQRLGEE TVAIRQIPAL LKQAEATQLV
RDVLADLLEY GTSDRIQAHL NELLATMACH GAVRANRRLT LPEMNALLRD MEQTERSGQC
NHGRPTWTQL GMDDLDKLFL RGR