Gene Pmen_0632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0632 
Symbol 
ID5109594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp698110 
End bp699525 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content68% 
IMG OID640501843 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001186132 
Protein GI146305667 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.419176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATAG GCGCGCTGGT TACCGCTGTG GGAGTGTTGT GGGCGGCCCT GGCTGCCGAG 
GTGCTGGCTG CCTCCGACGT GCGGGGCGTG CGCCTCTGGC GCGCGCCCGA CAACACCCGC
CTGGTCTTCG ACCTGTCCGG CCCGGTGCAG CACAGCGTGT TCACGCTCGC GGCGCCCGAT
CGCATCGTCA TCGACGTCAG CGGCGCCAAG CTGGCGACCA ATCTCGAACA GTTGTCGCTG
GCCAACACGC CGATCACCGG CGTACGCAGC GCGCAGCGCA GTGCCGACGA TCTGCGCGTG
GTCATCGACC TGTCGGCGCC GGTCACGCCC AAGAGTTTCT CCCTGGCGCC CAACCAGCAG
TACGGTCATC GCCTGGTGGT GGATCTGTTC GATCAGGGCA GTACTCCGCC CGCGGCCCAG
ACGCCCAGCG TCGCCGCCAG CGCGCCGCCC GTGCCGGTGA CGCCGACCCA GCCACCGCCC
AAGCTGACCC CCGTGCCCAA CGGCAAGCGT GACATCATCA TCGCCATCGA CGCCGGTCAT
GGGGGGGAGG ATCCGGGGGC GCTGTCTCCG GTCAAGGGGC AATACGAAAA GCACGTGACC
CTGGCCATTT CCCGCGAACT GCAGCGGCAG ATCAACGCCG AGAAGGGCTT CCGTGCCGAA
CTGGTGCGCA CCGGCGACTA CTTCATTCCG CTGCGCAAAC GCACCGAGAT CGCCCGCAAG
AAGGGCGCCG ATCTGTTCGT GTCCATTCAC GCCGACGCCG CGCCGCGGGC TTCCGCCTTC
GGTGCCTCGG TGTATGCGCT GTCCGAGCGC GGCGCCACCT CCGAGACCGC GCGCTGGCTG
GCCGACGCCG AGAACCAGTC CGACCTGATC GGCGGTGCCG GCAACGTCAG CCTGGACGAC
AAGGACAAGA TGCTCGCCGG CGTGTTGCTG GACCTGTCGA TGACCGCCTC GCTGTCCTCG
AGCCTGAACG TCGGGCAGAA GGTGCTGAGC AACATGGGGC GCATCACGCC GCTGCACAAG
CGCCGCGTCG AGCAGGCCGG CTTCATGGTG CTGAAATCGC CGGACATCCC GTCGATCCTG
GTTGAAACCG GCTTCATCTC CAACCCCAAC GAGGCCAAGA AGCTGCATAC CGCGAGTCAT
CAGCAGGCGC TGGCGCGTTC GATCACCTCC GGGGTCAAGC AGTTCTTCCA CGAGAATCCG
CCGCCTGGCA CCTATGTCGC CTGGCTGCGC GACGAGGGCA AGATCGCCGC CGGTCCGCGC
GAGCACGTGG TGGCACGTGG CGAGAGCCTG GCGCTGATCG CCCAGCGCTA TCAGATCAGC
CTGGCGGTCC TGCGTAGCGC CAACAACCTC AATGGCGACG TGATCAAGGT CGGCCAGACA
TTGCAGATTC CCGCCACCGC GCTGGCGGCC CAGTAG
 
Protein sequence
MRIGALVTAV GVLWAALAAE VLAASDVRGV RLWRAPDNTR LVFDLSGPVQ HSVFTLAAPD 
RIVIDVSGAK LATNLEQLSL ANTPITGVRS AQRSADDLRV VIDLSAPVTP KSFSLAPNQQ
YGHRLVVDLF DQGSTPPAAQ TPSVAASAPP VPVTPTQPPP KLTPVPNGKR DIIIAIDAGH
GGEDPGALSP VKGQYEKHVT LAISRELQRQ INAEKGFRAE LVRTGDYFIP LRKRTEIARK
KGADLFVSIH ADAAPRASAF GASVYALSER GATSETARWL ADAENQSDLI GGAGNVSLDD
KDKMLAGVLL DLSMTASLSS SLNVGQKVLS NMGRITPLHK RRVEQAGFMV LKSPDIPSIL
VETGFISNPN EAKKLHTASH QQALARSITS GVKQFFHENP PPGTYVAWLR DEGKIAAGPR
EHVVARGESL ALIAQRYQIS LAVLRSANNL NGDVIKVGQT LQIPATALAA Q