Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0630 |
Symbol | |
ID | 5109592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 696133 |
End bp | 697632 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640501841 |
Product | carbohydrate kinase, YjeF related protein |
Protein accession | YP_001186130 |
Protein GI | 146305665 |
COG category | [G] Carbohydrate transport and metabolism [S] Function unknown |
COG ID | [COG0062] Uncharacterized conserved protein [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.522163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCCAC TTTCCGCCTC CTTGCCCCTG AGCCTGCACG GCGCCGCGCA GGTGCGTGCG CTGGATGCCG CGCTGATCGC TGCCGGCACC CCCGGCTACG AACTGATGCA GCGCGCCGCC CATGCCGCCT GGCGCGTGCT GCGCAGGCGC TGGCCGGATG CTGGCGAGAT CACCGTGCTG GCCGGGCGCG GCAACAATGC CGGTGACGGC TATCTGATCG CGGCGCTGGC TCAACGCGCC GGCTGGCGGG TGCGGGTACT GGCGGTGGGC GAGCCGGCGG CGCTGAGTGG CGATGCGGCG CAGGCCTGTG CCGAGGCGCG CAGCGCCGGA GTCGACGTGC GACCCTGGAG CGAATGTGCG CCGCTGGCCG GCGTGCTGGT CGATGCGCTG CTCGGCACCG GACTGGCCGG CGCCGTGCGC GAGCCTTATG CCCAGGCCAT CCGCATGATC AATCAGAGCG GTCTGCCGGT GCTGGCGGTG GATATCCCCT CCGGCCTGCA GGCCGATCAT GGGGCGCGCC TTGGCTTGGC GGTGCAGGCC GACGTGACGG TGACCTTCAT CGCGCTCAAG CTCGGCCTGT TCACCGGTCT CGGCCCTGAG TTGTGCGGCG AGCTGCAGTT CGACGATCTA CAGGGCGACC CTCGGCTTCT GGCGCAGGCC CCAGCCCTGG CGCAGCGCCT GGACCTGGCC AACCTGCCAC GTCTGGCGCC GCGCTCGCCG CTAGCGCACA AGGGCCAGTT CGGCCACCTG CTGGTGGTCG GTGGCGATCT GGGCATGGGC GGCGCGGCGC TGCTCAGTGC CGAAAGCGCG TTACGCGCTG GTGCCGGCCT GGTGTCGCTG GCGACCCGGC CCGAGCATGT GCAGGCGGCG CTGGTGCGGC GCCCTGAGGT GATGTGTTCG GCGCTGGCGT CGGCCAATCA GCTGCTCGGC CTGGCCGAGC GCGCCACTGT CTGCGTGGTC GGGCCAGGGT TGGGCCAGAA TGCATGGGGC CGCAGCCTGC TTTCGGTGGC CGCGGGTCTG CCGGTGCCTC AGGTGTGGGA TGCCGATGCG CTCAACCTGC TGGCGGCCGG TCAGGTCGGT GCGCCGCGGC AGGGGGTGCT GACCCCGCAT CCGGGCGAGG CCGCCCGTTT GCTGGGCGTG GCGAGTGCCG AGGTGCAGGC GGACCGGCCC GCCGCCGCGC GGGCGCTGGC CCAGCGCTTT GGTCTGGTGG TGGTGCTTAA GGGGGCGGGC AGCCTGATCG CCGCTCCGGA CGGAAGCCTG GCGCTCTGTG ATCGCGGCCA TCCGGCCATG GCCGGTGCCG GATTGGGGGA TGTATTGGCG GGTCTGATCG GCGCCCTGCT GGCGCAGGGC ATGGCGGCCT TCGATGCCGC TTGCCTGGCG GTGTGGCTGC ACGCGCATGC GGGCGAAAAT CTCGGCAGGC AGGGGCGTGG GCTGGCTGCT GGCGATCTGC CTGACACCAT TCGTCAGTTA CTGGAGGAGT TCTGTCCTTG TCTGAGTTGA
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Protein sequence | MHPLSASLPL SLHGAAQVRA LDAALIAAGT PGYELMQRAA HAAWRVLRRR WPDAGEITVL AGRGNNAGDG YLIAALAQRA GWRVRVLAVG EPAALSGDAA QACAEARSAG VDVRPWSECA PLAGVLVDAL LGTGLAGAVR EPYAQAIRMI NQSGLPVLAV DIPSGLQADH GARLGLAVQA DVTVTFIALK LGLFTGLGPE LCGELQFDDL QGDPRLLAQA PALAQRLDLA NLPRLAPRSP LAHKGQFGHL LVVGGDLGMG GAALLSAESA LRAGAGLVSL ATRPEHVQAA LVRRPEVMCS ALASANQLLG LAERATVCVV GPGLGQNAWG RSLLSVAAGL PVPQVWDADA LNLLAAGQVG APRQGVLTPH PGEAARLLGV ASAEVQADRP AAARALAQRF GLVVVLKGAG SLIAAPDGSL ALCDRGHPAM AGAGLGDVLA GLIGALLAQG MAAFDAACLA VWLHAHAGEN LGRQGRGLAA GDLPDTIRQL LEEFCPCLS
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