Gene Pmen_0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0615 
Symbol 
ID5109577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp677951 
End bp678763 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content65% 
IMG OID640501826 
Productaldo/keto reductase 
Protein accessionYP_001186115 
Protein GI146305650 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA CATTGCACGA CCTGCACCGC CCGCTGGGTT CCACTGGCCT GATGGTCTCG 
CCCCTTGGCC TCGGTACGGT CAAGCTCGGT CGTGATCAGG GCGTCAAATA CCCCAACGGC
TTCACCATCC CCGACGATGC CCAGGCCTTG GCCCTGCTGC GCCAGGCCCG CGAGCTGGGC
ATCAACCTGA TCGACACCGC CCCGGCCTAC GGCATCAGCG AGCAGCGCCT CGGCCCGCTT
TTGCGTGGTC AGCGTGATGA ATGGGTGATC GTCAGCAAGA CGGGTGAGGA ATTCGAGGGC
GGCCAGTCGC ACTTCGATTT CTCCCCGGCA CACACGCGGC TGTCGGTGGA GCGCAGCCTC
AAGCGTCTGC AGACCGACCG CATCGACCTG CTGCTGGTGC ATTCCGATGG CAACGACCTC
AGCGTGCTGC GCGATACGGG GGTGTACGAG ACGCTGGCCT CGCTCAAGCG CGAGGGCAAG
ATCCTCGCCT ATGGCCTCTC CGGCAAGACG GTAGAGGGCG GGCTGCTGGC GCTGGAACTG
GGCGACTGCG CCATGGTCAC CTATAACCTG AGCGAGCAGG GCGAAAAGCC GGTGCTGGAT
TACGCTGCCA GTCACGCCAA GGGCATTCTG ATCAAGAAGG CCCTGGCCAG CGGGCACGCC
TGCCTGGCCG AGGGTGTCGA TCCGGTGCGT GCCAGCTTCG AGCTGATCTT CGATCACCCG
GGGGTCAGCA GTGCCATCGT CGGTACCATC AACCCGGCCC ATCTGGCGGC CAACGTGGCG
ACCGCCGCGG CGGTGCTGCA GGACATCTGC TGA
 
Protein sequence
MKSTLHDLHR PLGSTGLMVS PLGLGTVKLG RDQGVKYPNG FTIPDDAQAL ALLRQARELG 
INLIDTAPAY GISEQRLGPL LRGQRDEWVI VSKTGEEFEG GQSHFDFSPA HTRLSVERSL
KRLQTDRIDL LLVHSDGNDL SVLRDTGVYE TLASLKREGK ILAYGLSGKT VEGGLLALEL
GDCAMVTYNL SEQGEKPVLD YAASHAKGIL IKKALASGHA CLAEGVDPVR ASFELIFDHP
GVSSAIVGTI NPAHLAANVA TAAAVLQDIC