Gene Pmen_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0613 
Symbol 
ID5109575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp676383 
End bp676715 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content65% 
IMG OID640501824 
Productsmall multidrug resistance protein 
Protein accessionYP_001186113 
Protein GI146305648 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.375677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGAT ACCTCTACCT CGCCATTGCC ATCGCCGCCG AAGTGGTCGC CACCACCTCG 
ATGAAGGCCA TCGACGGCTT CAGCAAGCCG TTGCCGTTGC TGCTGGTGGT GGGCGGCTAC
GCGATCGCCT TCTGGATGCT GACCCTGGTG GTGCGCACCA TTCCGGTGGG CATCGCCTAC
GCCATCTGGG CCGGCCTGGG CATCGTGCTG GTCAGCATCG CCGCGCTGTT TCTCTACCAG
CAGAAGCTCG ACCTGCCGGC CGTGCTCGGC ATGGGGTTGA TCGTCAGCGG GGTGGTGGTG
ATTCAGCTGT TCTCGCAATC GACCGGGCAC TGA
 
Protein sequence
MPGYLYLAIA IAAEVVATTS MKAIDGFSKP LPLLLVVGGY AIAFWMLTLV VRTIPVGIAY 
AIWAGLGIVL VSIAALFLYQ QKLDLPAVLG MGLIVSGVVV IQLFSQSTGH