| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0608 |
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| Symbol | |
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| ID | 5109570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 669514 |
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| End bp | 670113 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640501819 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_001186108 |
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| Protein GI | 146305643 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAACG ACGACATCGA AATCCTCTCG CGCGAGAACT GCTTTCGCGG CTTCTACCGG
CTCGACCGGA TCAAGCTGCG CCATCGCCAG TTCTCAGGGG ACATGGGCCC ATCCATCACC
CGGGAGCTGT TCGTGCGTCA CGACGCGGTG TGCGTGCTGC CCTACGATCC GCAGCGCGAC
GAGGTGGTGC TGATCGAGCA GTTTCGCGTC GGCGCCATGG ACAAGAGCAC CAACCCCTGG
CTGCTGGAGC TGGTCGCCGG CTTGATCGAC AAGGACGAGG AACCCGAGGA GGTCGCCCGT
CGCGAAGCCG TCGAGGAAGC CGATCTGACC CTGACCTCGC TGTGGCCGAT TACCCAGTAC
TACCCCTCGC CCGGCGGCTC GGACGAACGC GTGCATCTGT TCGTCGGGCG TTGCAGCAGC
GAGGGCGCCG GTGGCGTGCA TGGCCTGCCT GAAGAAGGCG AGGACATTCG CGTGCAGGTG
ATGGCCCTGG AAGATGCCCT GACCGCCGTA CGCGACGGGC GCATCGACAA CGCGGCGAGC
ATCATCGCCC TGCAGTGGCT GGCGCTGAAT CGAGACGAAG TACGAGGAAT GTGGTCGTGA
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| Protein sequence | MGNDDIEILS RENCFRGFYR LDRIKLRHRQ FSGDMGPSIT RELFVRHDAV CVLPYDPQRD
EVVLIEQFRV GAMDKSTNPW LLELVAGLID KDEEPEEVAR REAVEEADLT LTSLWPITQY
YPSPGGSDER VHLFVGRCSS EGAGGVHGLP EEGEDIRVQV MALEDALTAV RDGRIDNAAS
IIALQWLALN RDEVRGMWS
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