| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0601 |
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| Symbol | |
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| ID | 5109563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 661710 |
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| End bp | 663959 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501812 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001186101 |
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| Protein GI | 146305636 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAT CCCTCGATTT GAGCCTGGAA GGCGTTGAAC GCCGGTCACT CGCCGACTTC
ACCGAGCAGG CTTATCTCAA CTACTCCATG TACGTGATCA TGGACCGCGC CCTGCCGCAC
ATCGGCGACG GCCTGAAACC CGTGCAGCGG CGCATCGTCT ACGCCATGAG CGAGCTGGGC
CTGGACGCCG ACGCCAAGCA CAAGAAGTCC GCGCGCACCG TCGGTGACGT ACTCGGCAAG
TTCCACCCGC ACGGCGACAG CGCCTGCTAC GAAGCCATGG TGCTGATGGC GCAGCCGTTC
TCCTATCGCT ACACCCTGGT CGACGGCCAG GGCAACTGGG GTGCACCGGA CGATCCCAAG
TCCTTCGCCG CCATGCGCTA TACCGAGGCG CGCCTGTCGC GCTACTCGGA GGTGCTGCTG
TCCGAGCTGG GCCAGGGCAC CGTGGACTGG GTACCGAACT TCGACGGCAC CATGAACGAG
CCAGCCACTC TGCCGGCGCG CCTGCCCAAC CTGCTGCTCA ACGGCACCAC CGGCATCGCC
GTGGGCATGG CCACCGACGT GCCGCCGCAC AACCTGCGCG AGGTAGCGGC TGCCTGCGTG
CGCCTGCTGG ACGAGCCGGG CGCCACTGTC GAGCAGCTGT GCGAACACAT CCAGGGCCCG
GACTTCCCCA CCGAGGCCGA GGTCATCACG CCCAAGGCGG ACTTGCTGAA GATCTACGAG
AGCGGCCGCG GCTCGGTGCG CATGCGCGCC GTGTACCGGG TAGAGGACGG CGATATCATC
GTCACCGCCC TGCCGCATCA GGTCTCCGGG GCCAAGGTGC TGGAGCAGAT CGCCGCGCAG
ATGCAGGCCA AGAAGCTGCC GATGGTCGCC GACCTGCGTG ACGAGTCGGA CCACGAGAAC
CCCACCCGCA TTGTCATCAT CCCGCGTTCC AACCGCGTCG ACGCCGACGA GCTGATGACC
CACCTGTTCG CCACCACCGA TCTGGAGTCC AGCTACCGGG TCAACACCAA CGTCATCGGC
CTCGACGGCA AGCCGCAGGT CAAGGATCTG CGCACCCTGC TCAGCGAGTG GCTGGTGTAC
CGCGTCGGCA CCGTGCGCCG CCGCCTGCAG TTCCGCCTGG ACAAGGTGGA AAAGCGCCTG
CACCTGTTGG AAGGCCTGCT GATCGCCTTC CTCAACCTGG ATGAAGTGAT CCGCATCATC
CGCACCGAAG ACCAACCCAA GCCGGTGCTG ATGGAAGCCT TCGGCCTGAC CGAGGTGCAG
GCCGACTACA TCCTCGACAC CCGTCTGCGT CAGCTGGCGC GCCTGGAAGA GATGAAGATC
CGCGGCGAGC AGGACGAGCT GGCCAAGGAG CGCGAGAAAC TGCTGGCCCT GCTCGGCAGC
GAAGCCAAGC TGAAGAAGCT GGTGCGCAAG GAAATCATCG AGGACGCCGA GAAGTACGGC
GACGACCGCC GCTCGCCGAT CGTCGCCCGC GCCGAGGCCA GGGCGCTGTC GGAAACCGAG
CTGATGCCGA CCGAGCCGGT TACCGTGGTG CTCTCGGAAA AAGGCTGGGT GCGCTGCGCC
AAGGGCCACG ACATCGACGC CACCGGCCTG TCCTACAAGG CCGGCGACGG CTTCAAGGCC
GCCGCGCCCG GACGCTCGAA CCAGTACGCG GTGTTTATCG ACTCCACCGG CCGCAGCTAT
TCGCTGGCCG CCCACAGCCT GCCGTCGGCG CGTGGCCAGG GCGAGCCGCT GACCGGCCGC
CTGACCCCGC CGCCAGGCGC GACCTTCGAA TGCGTGATGC TGCCGGAAGA CAGCGCGCTG
TACGTGATCG CCTCCGACGC CGGCTACGGC TTCGTGGTCA AGGGCGAGGA CCTGCAGGCC
AAGAACAAGG CCGGCAAGGC GCTGCTCAGC CTGCCCAACG GCGCCAAGGT GGTGGCACCC
AAGCCTGTAA CCAACCTGGA AGACGATTGG CTGGCCGCGG TGACGACCGA AGGCCGTCTG
CTGCTGTTCA AGGTCACCGA TCTGCCGCAA CTGGGCAAAG GCAAGGGCAA CAAGATCATC
GGCATACCCG GTGAGCGAGT GGCCAGTCGC GAGGAATACC TGACCGACCT GGCCGTGCTG
CCGAGTGGCG CCAGCCTGGT GCTGCAGGCC GGCAAGCGCA CCCTGACGCT CAAGGCAGAC
GACCTGGAGC ACTACAAGGG CGAGCGTGGC AGGCGCGGCA ACAAACTGCC CCGAGGTTTC
CAGCGAGTCG ATCAGCTTCT GGTGGAATAG
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| Protein sequence | MSESLDLSLE GVERRSLADF TEQAYLNYSM YVIMDRALPH IGDGLKPVQR RIVYAMSELG
LDADAKHKKS ARTVGDVLGK FHPHGDSACY EAMVLMAQPF SYRYTLVDGQ GNWGAPDDPK
SFAAMRYTEA RLSRYSEVLL SELGQGTVDW VPNFDGTMNE PATLPARLPN LLLNGTTGIA
VGMATDVPPH NLREVAAACV RLLDEPGATV EQLCEHIQGP DFPTEAEVIT PKADLLKIYE
SGRGSVRMRA VYRVEDGDII VTALPHQVSG AKVLEQIAAQ MQAKKLPMVA DLRDESDHEN
PTRIVIIPRS NRVDADELMT HLFATTDLES SYRVNTNVIG LDGKPQVKDL RTLLSEWLVY
RVGTVRRRLQ FRLDKVEKRL HLLEGLLIAF LNLDEVIRII RTEDQPKPVL MEAFGLTEVQ
ADYILDTRLR QLARLEEMKI RGEQDELAKE REKLLALLGS EAKLKKLVRK EIIEDAEKYG
DDRRSPIVAR AEARALSETE LMPTEPVTVV LSEKGWVRCA KGHDIDATGL SYKAGDGFKA
AAPGRSNQYA VFIDSTGRSY SLAAHSLPSA RGQGEPLTGR LTPPPGATFE CVMLPEDSAL
YVIASDAGYG FVVKGEDLQA KNKAGKALLS LPNGAKVVAP KPVTNLEDDW LAAVTTEGRL
LLFKVTDLPQ LGKGKGNKII GIPGERVASR EEYLTDLAVL PSGASLVLQA GKRTLTLKAD
DLEHYKGERG RRGNKLPRGF QRVDQLLVE
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