| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0563 |
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| Symbol | |
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| ID | 5108187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 611804 |
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| End bp | 614530 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640501776 |
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| Product | type I restriction-modification system, M subunit |
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| Protein accession | YP_001186065 |
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| Protein GI | 146305600 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0170311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000000000803096 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAAGCG CCAAACTGAC CCTCGCACGG TTAGAGAACC TGCTTCTGAC CGCCTGTGAT
GACCTGCGCG GCAACATGGA TGCCAGCGAG TACAAGGAGT ACATCTTCGG CATGCTCTTC
CTGAAGCGTG CGAGTGATCT GTTTGATCAG CGTAGGGACG AGATCAGGAA GGAAGGCAAA
GCGGCCGGTC TCAGTGATGA TGACATCAAG GCCAACCTTG AGGACCCCGA TCAGTATTCA
GGCAAGTACT TTTTCGTGCC GGAGCGCGCG CGCTGGAATG ATGGTTGGGT TGACGAAAAG
TGGAACGTTC ATCCTGCCCT CAAACACGTC AAAGAGAACG TCGGTACGGC CCTCAACAAG
GCCCTGGAAG CTTTGGAAGA GGCCAACCCC GAGGCGCTGC AGGATGTGCT GAAGCACATC
AACTTCAACA AGAAAATCGG CCAGAACACC CTAGATGACG ACACGCTCGT CAACTTCATC
CAGAACTTCG AAAAGATTCC GCTGCGCGAT GAGGATTTCG AGTTCCCGGA CCTTCTCGGC
ACGGCCTATG AGTGGCTGAT CAAACACTTT GCCGACTCGG CGGGCAAGAA GGCTGGAGAG
TTCTACACCC CGGCCGAGGT GGTGCGTATC TGTGTTGAGA TCTGCGATCC GCAAGAAGAC
ATGAGCGTCT ACGACCCGAC GGTTGGCTCG GGCGGTATGC TGATTCAGGC TCGCGACTAC
TTGCGAGAGT GCGGCGCAGA TGCTGCCGAG CTAGCGCTCT ATGGCCAGGA AAAGATGGGT
ACCACTTGGT CCATCTGCAA GATGAACATG CTGCTACACG GGATTTCTCA CGCAGTGATT
CGTCAGCAGG ACACCCTGCG CGAGCCGCAG CACCAAGCCG AAGACGGTAA CCTGATGCGC
TTCGACCGTG TATTGGCCAA CCCTCCCTTC AGCCAAAACT ACATCAAGAA GGACATCAAA
CACCCCGGTC GATTCCCGGT GTGGATGCCC GAGAAGGGCA AGAAAGCCGA TCTGATGTTC
GTGCAGCACA TGCTCGCCGT ACTCAAGCAC GATGGCCGCA TGGCCTGCGT GATGCCGCAT
GGTGTTCTGT TCCGTGGCGC TGAGGAGCGT GAGGCTCGCA AGTACTTTAT CGACAGAGGC
TATCTTGAGG CGGTGATTGG GCTGCCCAGC AATCTGTTCT ACGGCACCGG CATTCCGGCG
TGCATTCTAG TGCTCAATAA GGCCGGTGCC GCTGAGCGCA AACATGTGCT GTTTATCAAC
GGCGACCGCG AGTATCGCGA AGGTAAGGCC CAGAACTACC TGCGACCGGA GGATATCGAC
AAAATCGTCC ATGCCTACCG TGCGGGGCTG GAGATTCCTG GCTATGCGCA GCCCGTGCCG
GTCGAGGCGA TTTGCGCCGA AGATTACAAC TGCAATATCC GCCGCTATGT GGACAACGCT
CCGCCTGCGG AACCGCATGA CGTTCGCGCC CATCTGCACG GTGGTGTGCC GGTCACGGAA
ATCGATGCGC TGGAGCACTT CTGGCAGAAC TATGCGGGCC TGCGCGAAAG CTGCTTTGTG
CCGCGTGCGG TAGCTGCAGC TGGCGCAGCC TATGCGGACT TTGCTCCAGC CCTGGCCGAC
AAGCGCGAAA TCGCTGCACA TATAAATGCC CACCCTGGCG TTACCCAGCG GCAGGCGCAG
TTTATGGCTG AGCTGCAGGT CTGGTGGGCG CAGCATCTGC CCCTGATCGA AGCCTTGGCC
CCGGATGCCG AAAACCAGCA GGCCCGCGCC AATAACGTCT ACGCCATGCG CGCCACCTTG
CTCGACAGCA TCGAGCGCAC CTTCGCCGGC CAGCATTTGC TTAATCGCTA CCAGGTGCGT
GGCGCTTTCG CCAATTATTA CAAGCTGCTC GCGGCTGACT TTAAATCCAT CGCAGCCAGC
GGCTGGGGGC CGGAGCTGAT TCCGGACGAG GATATCCTGC ACAGCCAGTT CCCCCAGGTG
CTGGCGGAGC TTGAGCAACA GCATGCTCGT CTGGCGGAAC TGCAAGCGCT GTTTGCCGCC
GCCAGCGAGG AAGACTTTGA AGACAGCGAA GGCACCGGCG TGCTGCCGGC CGATGAGGTC
AAGGCGCTCA AGGATGAACT CAAGGAAAGC ACCGCTGAAT GGAAGGCCCA GCTCAAGACA
CTAAAAGGCG CGGTGGCGGA CCTTTTCGTC GAGATCAAGG TGGCCGGCAA GCTGCCAAAG
GGCGCGGACA AGGGCTATTA CACGCAGGGC TTCACCGCTA AAGAGGCGCA ATTCGGCAAT
GGCCAGCGTG TGCTTGATCT GGCGATTTCC GTTGGCCATG CCTCGCCGAT TGCCAGCGTG
GTGGAAGAGG CCATGGCGCA GGGGCAGCAG GCCAAAAATA GCTCAGGGCG AGCGGAGGCC
CGTCTAGCCA CTCACAAAGC GCTGGAGGCT GAGGCCAAAG CGGTCAAGGC GGCCATCAAG
TCAACCGAGG CGATGAAAGA CGAACTAGTG GCCAAGGCCC GCCTGAAAAT CAGCGATGAC
GAGGCCCGCG TGGTGATTGT CGAGCGCCTG GGTAAGGTGT TGTTCGATAG TTATCGCCAG
TATTTGCGTG CCGACCAGAG GGCCTGCATT GCCGCCGTCG AGAATCTATG GGGAAAGTAC
GCAATTACCG CCAAGCAGAT CGAGGCTGAG CGCGATCAGG CTGCAAAGGC TCTGCAGGAC
TTTCTGGTGG AGTTGGGGTA TGAGTGA
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| Protein sequence | MASAKLTLAR LENLLLTACD DLRGNMDASE YKEYIFGMLF LKRASDLFDQ RRDEIRKEGK
AAGLSDDDIK ANLEDPDQYS GKYFFVPERA RWNDGWVDEK WNVHPALKHV KENVGTALNK
ALEALEEANP EALQDVLKHI NFNKKIGQNT LDDDTLVNFI QNFEKIPLRD EDFEFPDLLG
TAYEWLIKHF ADSAGKKAGE FYTPAEVVRI CVEICDPQED MSVYDPTVGS GGMLIQARDY
LRECGADAAE LALYGQEKMG TTWSICKMNM LLHGISHAVI RQQDTLREPQ HQAEDGNLMR
FDRVLANPPF SQNYIKKDIK HPGRFPVWMP EKGKKADLMF VQHMLAVLKH DGRMACVMPH
GVLFRGAEER EARKYFIDRG YLEAVIGLPS NLFYGTGIPA CILVLNKAGA AERKHVLFIN
GDREYREGKA QNYLRPEDID KIVHAYRAGL EIPGYAQPVP VEAICAEDYN CNIRRYVDNA
PPAEPHDVRA HLHGGVPVTE IDALEHFWQN YAGLRESCFV PRAVAAAGAA YADFAPALAD
KREIAAHINA HPGVTQRQAQ FMAELQVWWA QHLPLIEALA PDAENQQARA NNVYAMRATL
LDSIERTFAG QHLLNRYQVR GAFANYYKLL AADFKSIAAS GWGPELIPDE DILHSQFPQV
LAELEQQHAR LAELQALFAA ASEEDFEDSE GTGVLPADEV KALKDELKES TAEWKAQLKT
LKGAVADLFV EIKVAGKLPK GADKGYYTQG FTAKEAQFGN GQRVLDLAIS VGHASPIASV
VEEAMAQGQQ AKNSSGRAEA RLATHKALEA EAKAVKAAIK STEAMKDELV AKARLKISDD
EARVVIVERL GKVLFDSYRQ YLRADQRACI AAVENLWGKY AITAKQIEAE RDQAAKALQD
FLVELGYE
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