| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0559 |
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| Symbol | |
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| ID | 5108183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 603216 |
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| End bp | 606551 |
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| Gene Length | 3336 bp |
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| Protein Length | 1111 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501772 |
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| Product | potassium efflux protein KefA |
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| Protein accession | YP_001186061 |
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| Protein GI | 146305596 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000000200237 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCAGT TGCGCCGTTC GCTAGCCCTC ATCCTGTTTC TCCTGTGTTT CGGCCTGAGC
GCCGCGCACG CCGAAGAGCC GCCCAAGGCC GCTGATGTCC AGCAGAGCCT GGATACCCTG
GCCGACCGCA AACTGCCGGA GGCCGAGCAA CTGGCGCTGA AGCAGACCCT CGAGCAGACG
CTGCGCATGC TCAAGGACCG CGACACCAGC GAACAGCGGC TGAACGACCT GCGCAAGCAG
CTCGATGGCG CGCCACGCCT GATCACCGAA GCCCAGCGCG AGCTGGACCG GCTCAAGGCC
AGCCCCGAGG TAGCCGCCGC CGAGCGCCAC GCGCGCACCT CGCTGGCACA ACTGGAACAG
CTGCTGAACG AGCGCTCCAA CCAGCTGACC GAATGGAACA AGGCGATCAT CGAGGCCAAT
AGCCTGGTGA TCACCGCGCA GACCCGCCCC GAGCGCGCCC AGGCCGAGAT CAGCCAGAAC
CAGGCGCGCA GCCAGCAGAT CAACAACAGC CTGAAAAGCG GCCGGGACGA CGGCAAGCCG
CTGACGCCGG AACGGCGCGC CCTGCTCAAC GCCGAGCTCG CCCAGCTCGC CGCGCAGACC
CAGCTGCGCC GCCAGGAAAT GGCCGGCAAC AGCCAGCTGC TGGACCTCGG CAGCGCCCAG
CGTGCGCTGC TCGAGGAGCG CATCCGCCGC GCCGAGCTGG AGCGCCAGGA GCTGCAGAGC
CTGATCAACG AACGCCGCCG CGCCGAGTCG GAGCAGACCG TCGCCGAGCA GTCGCGCGAG
GCCGAGCGTG CCAGCTCCGA TCGCCTGCTG GCTCGGGAAA GCTCGCTCAA CCTCAAGCTG
TCCGATTACC TGCTGCGCTC CACCGACCGC CTCAACAGCC TGACCGAGCA GAACCTGAGA
ACCCGCCAGC AACTGGACAA CCTCAACCAG GCCAACCAGG CCCTGGACGA GCAGATCCGG
GTGCTGCAGG GCAGCCTGCT GCTGTCGCGC ATCCTCTACC AGCAGAAACA GGCGCTGCCG
CAGCTGCAGC TGGAAGACAG CCGGCTGGCC GACGAGATCG CCGATATCCG CCTGTATCAG
TTCGACCTGA ACAAGCAGCG CGACGAGATC AGCGATCCGG CGCGTTATGT CGACAACCTG
CTGCAGGGCC AGCCGAGCGA GAACGTCACC CCGGAGCTGC GCAATGCCCT GCTCGATCAG
CTGAAAACGC GCCGCGAGCT GCTCGAGCGC CTGAGTCGCT CGCTCAACTC CCTGCTCAAC
GAGTCGATCA CCCTGCAGCT CAATCAGCGC GAACTGCACA GCACCGCCAG CAACCTGCGC
GCCACCATCG ACGAGCAGAT GTTCTGGATT CCCAGCAACA AGCCGCTGGA TCTCGAGTGG
CTGAAAAGTG CCCCGCGGCG CCTGCAGCAG CAGCTCGACA GCCTGCCCTG GGGCGTGGTG
CTGAGCGAAC TGAGCGCGGC GCTGCTGGAG CGACCGCTGG TGTTTCTGCC GTTGCTGCTG
CTCTGCGCGC TGATTCTGTG GCGCCGCCAG TACCTGTTCG GCAAGCTCGG CAACCTGCAT
GCCGATATCG GCCACTACAA GCGTGACAGC CAGCTGCACA CCCCCTTCGC CCTGGGCCTG
AACCTGGTGC TGGCGCTGCC GGTCGCGCTG TTCCTGATGC TCTGCGGCTA TGCCCTGCTG
CACGATGCAC GCGGGCAGAA CCTCTACCTG GGCCGCGCGT TCTACGAGAT GGCCGAAGCC
TGGCTGGTGT TCTATACCCT GCATCGCATC CTGGCACCCG ATGGCGTGGC GGTGCTGCAC
TTCCACTGGC CACCGGCCAA CGTGTCCTTC TTCCGCCGCC ACCTGCGCCA TCTGGGCATG
GTGGTGATGG CGCTGGTGGC GGTGGTGAGC ATCGCCGAGC ACCAGCCCGA CAGCCTGGCC
AGCGACGTGA TCGGCATCTG CGTGGTGCTC AGCTGCTATG CGCTGATGGC CTGGCTGATG
TTCCGCCTGC TGTTCAATGC CCCGCAGCGG GAACACACTT CGGCGCTGCG TACCAGCGTC
GGGATGCTGT TCAATGTGCT GCCGCTGGCG CTGATCGGCG CGGTTGCGTT CGGCTACTAC
TACACCGCCC TGAAGCTGAC CGACCGCCTG ATCGACACCC TGTACCTGCT GATCATCTGG
CTGATCGTCG AAGCCGCCCT GATCCGCGGC CTGAGCGTGG CCGCACGGCG CCTGGCCTAC
CAGCGCGCCC TGGCCAAGCG CCAGGCACAG AGCAAGGAAG GCGACGGCGA GATCAGCATC
GAGGAGCCGA CGCTGGATAT CGAACAGGTC AACCAGCAGT CGCTGCGCCT GATCCGCCTG
GCCCTGCTGG CCGGTTTCCT GGTCTGCCTG TACTGGGTCT GGGCCGAACT GATCGGGGTG
TTCACCTACC TGGAAACCGT CAGCCTGTAC GAATACAGCA GCGGCACCGG CGATACCGCC
ACCATGGTGC CGATCAGCCT GATGGACGTG CTTGGCGCGC TGATCATCGT CGCCATCACC
GTGGCCCTGG CGCGCAACCT GCCCGGTCTG CTCGAGGTGC TGGTGCTGTC ACGCCTGAAG
CTGGCCCAGG GCAGCGCCTA CTCCACCACC ACCCTGCTGT CCTACGTGCT GGTGGGTATC
GGTATCGTCA GCACCCTGTC CACCCTGGGG GTGAGCTGGG ACAAGCTGCA ATGGCTGGTG
GCGGCGCTGT CGGTGGGCCT GGGTTTCGGC CTGCAGGAGA TCTTCGCCAA CTTCATCTCC
GGCCTGATCA TCCTGTTCGA GCGTCCGGTG CGCATCGGCG ACGTGGTCAC CATCGGCAAC
CTGTCCGGTA CGGTGAGCAA GATCCGCATT CGCGCCACCA CCATCACCGA TTTCGACCAC
AAGGAAATCA TCGTTCCGAA CAAGACCTTC ATCACCGGCC AGCTGATCAA CTGGTCGCTG
AGCGACACGG TCACCCGCGT CACCCTCAAG GTGGGCGTCA GCTACGGCTC GGACCTGGAC
CTGGTACGCA AACTGCTGCT GCAGGCCGCC CAGGAGAACC CCCGCGTACT CAAGGAACCG
TCGCCGATCG TCTACTTCCT CAGCTTCGGC GAGAGCACCC TGGATCACGA GCTGCGCATC
CACGTGCGCG ACCTCGGCGA CCGCAACCCG GCTACCGACG AGATCAACCG CTTCATCGAT
CGCGAATTCG CCAAGCACGG CATCAACATC GCCTTCCGCC AGGTGGACGT GTACGTGAAG
AACCTCGACG CTGAGCAGCA TCTGCAGAAG GATGTGATCA AGGCGGCCGC CGCCGGCGCC
GCCGACAAGA AAAATCCGCC GCCCGCGGCG ACCTGA
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| Protein sequence | MPQLRRSLAL ILFLLCFGLS AAHAEEPPKA ADVQQSLDTL ADRKLPEAEQ LALKQTLEQT
LRMLKDRDTS EQRLNDLRKQ LDGAPRLITE AQRELDRLKA SPEVAAAERH ARTSLAQLEQ
LLNERSNQLT EWNKAIIEAN SLVITAQTRP ERAQAEISQN QARSQQINNS LKSGRDDGKP
LTPERRALLN AELAQLAAQT QLRRQEMAGN SQLLDLGSAQ RALLEERIRR AELERQELQS
LINERRRAES EQTVAEQSRE AERASSDRLL ARESSLNLKL SDYLLRSTDR LNSLTEQNLR
TRQQLDNLNQ ANQALDEQIR VLQGSLLLSR ILYQQKQALP QLQLEDSRLA DEIADIRLYQ
FDLNKQRDEI SDPARYVDNL LQGQPSENVT PELRNALLDQ LKTRRELLER LSRSLNSLLN
ESITLQLNQR ELHSTASNLR ATIDEQMFWI PSNKPLDLEW LKSAPRRLQQ QLDSLPWGVV
LSELSAALLE RPLVFLPLLL LCALILWRRQ YLFGKLGNLH ADIGHYKRDS QLHTPFALGL
NLVLALPVAL FLMLCGYALL HDARGQNLYL GRAFYEMAEA WLVFYTLHRI LAPDGVAVLH
FHWPPANVSF FRRHLRHLGM VVMALVAVVS IAEHQPDSLA SDVIGICVVL SCYALMAWLM
FRLLFNAPQR EHTSALRTSV GMLFNVLPLA LIGAVAFGYY YTALKLTDRL IDTLYLLIIW
LIVEAALIRG LSVAARRLAY QRALAKRQAQ SKEGDGEISI EEPTLDIEQV NQQSLRLIRL
ALLAGFLVCL YWVWAELIGV FTYLETVSLY EYSSGTGDTA TMVPISLMDV LGALIIVAIT
VALARNLPGL LEVLVLSRLK LAQGSAYSTT TLLSYVLVGI GIVSTLSTLG VSWDKLQWLV
AALSVGLGFG LQEIFANFIS GLIILFERPV RIGDVVTIGN LSGTVSKIRI RATTITDFDH
KEIIVPNKTF ITGQLINWSL SDTVTRVTLK VGVSYGSDLD LVRKLLLQAA QENPRVLKEP
SPIVYFLSFG ESTLDHELRI HVRDLGDRNP ATDEINRFID REFAKHGINI AFRQVDVYVK
NLDAEQHLQK DVIKAAAAGA ADKKNPPPAA T
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