| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0558 |
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| Symbol | |
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| ID | 5108182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 601741 |
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| End bp | 603204 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501771 |
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| Product | hypothetical protein |
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| Protein accession | YP_001186060 |
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| Protein GI | 146305595 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0397] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00000359024 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAAAAGC TCGACCAACT GACTTTCGAC AACCGCTTCG CCCGTCTTGG TGACGCTTTC
TCCACCGAAG TGCTGCCCGA ACCCATCGAG CAGCCACGCC TGGTGGTGGC GAGCAGTGAC
GCCATGGCCC TGCTCGATCT CGACCCGGCC GAGGCGCAGC GCGAGGAGTT CGCCGAGCTG
TTCGCCGGGC ACAAGCTGTG GGGTGAAGCC GAGCCGCGCG CCATGGTCTA CTCCGGCCAT
CAGTTCGGCG GCTATACGCC GCGCCTGGGC GATGGCCGCG GCCTGCTGCT CGGCGAGGTG
GTCAACGCGG CCGGCGAGCA CTGGGACCTG CACCTCAAGG GCGCCGGCCA GACCCCCTAC
TCGCGCATGG GCGACGGCCG CGCCGTGCTG CGCTCGTCGA TCCGCGAGTT CCTCGCCAGC
GAACACCTGC ACGCCCTGGG CATCCCCAGC TCGCGCGCGC TGTGCGTGAC CACCTCCGAC
ACCCCGGTAT GGCGCGAGAA GCAGGAGCGC GCGGCCATGG TCCTGCGCCT GGCGCCAAGC
CACGTGCGCT TCGGCCACTT CGAGTATTTC TATTACACGC GCCAGCACGA ACAGCTCAAG
GTGCTCGGCG AACACGTGCT GGCCAACCAC TTTCCCCAGT GCCTCACGCA GGACGAGCCC
TGGCTGGCGA TGTTCCGCGA GGTGCTGGAG CGCACCGCCG CTATGATCGC CCATTGGCAG
GCCTATGGCT TCTGCCATGG GGTAATGAAC ACCGACAACA TGTCGATCCT CGGCATCACC
TTCGACTACG GCCCATACGC CTTCCTCGAC GACTTCGATG CCAACCACAT CTGCAACCAC
TCCGACGACA CCGGCCGCTA CAGCTTCAGC AACCAGGTGC CCATTGCCCA CTGGAACCTG
GCCGCCCTGG CCCAGGCGCT GACGCCGATG ATCGAGGTGG AGAAGCTGCG CGAGACCCTG
GAGCTGTTTC TGCCGCTGTA TCAGGCCCAT TACCTCGACC TGATGCGCAA GCGCCTGGGC
CTGACCAGCG CCGAGGATGA CGACGAAGCC CTGGTGCAGC GCCTGCTGCA ACTGATGCAG
CAGGGCAAGG CGACCGACTA CAGCCTGTTC TTCCGCCAGC TCGGCGAGCA GGCACCGGCC
GATGCGCTGC AGGTGGTACG CAACGACTTC GTCGATCTGG CCGGCTTCGA TGCCTGGGGC
CGCGACTATC TGGCGCGCTG CGAGCGCGAG GGCCAGCAGC AGGACGAACG CCGAGCGCGC
ATGCACGCCG TCAATCCGCT GTACATCCTG CGCAACTACC TGGCGCAGCA GGTCATCGAG
GCGGCCGAGG CCGGTGACTA CGGCCCGGTG CGCGAGCTGC ACGCGGTGCT TTCGCGCCCG
TTCGACGAAC AGCCGGGCAT GCAGCGGTAT GCCCAGCGCC CGCCGGAGTG GGGCAAGCAC
CTGGAAATCA GCTGCTCCTC GTAG
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| Protein sequence | MKKLDQLTFD NRFARLGDAF STEVLPEPIE QPRLVVASSD AMALLDLDPA EAQREEFAEL
FAGHKLWGEA EPRAMVYSGH QFGGYTPRLG DGRGLLLGEV VNAAGEHWDL HLKGAGQTPY
SRMGDGRAVL RSSIREFLAS EHLHALGIPS SRALCVTTSD TPVWREKQER AAMVLRLAPS
HVRFGHFEYF YYTRQHEQLK VLGEHVLANH FPQCLTQDEP WLAMFREVLE RTAAMIAHWQ
AYGFCHGVMN TDNMSILGIT FDYGPYAFLD DFDANHICNH SDDTGRYSFS NQVPIAHWNL
AALAQALTPM IEVEKLRETL ELFLPLYQAH YLDLMRKRLG LTSAEDDDEA LVQRLLQLMQ
QGKATDYSLF FRQLGEQAPA DALQVVRNDF VDLAGFDAWG RDYLARCERE GQQQDERRAR
MHAVNPLYIL RNYLAQQVIE AAEAGDYGPV RELHAVLSRP FDEQPGMQRY AQRPPEWGKH
LEISCSS
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