| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0555 |
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| Symbol | |
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| ID | 5108179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 598502 |
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| End bp | 598945 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501768 |
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| Product | hypothetical protein |
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| Protein accession | YP_001186057 |
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| Protein GI | 146305592 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000129509 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCTGC CCGTGGAAAT CGCCCGCCAG CTCACCGAAC AGCAGATCGC CTTCGTCCGC
CGCAGCGGGC TCCAGGCCGA AGTGCTCGAA CCTGGCTTCG TACGCCTGTG CATGCCGCTG
GAAGGCAACC AGAACCATAT CGGCAGCATG TATGCGGGGG CGCTGTTCAC CCTGGCGGAA
ATTCCCGGCG GCGCGCTGTT TCTCACCAGC TTCGACGTGC AGCGCTTCTA CCCCATCGTC
AAGGAGCTGA ACCTGCGCTT TCGCCGCCCG GCCAGCGGCG ACATCCGCGT CGAGGCGCGC
CTGTCGGCGC AGGAGATTGA CGATCTGCAG GCGCGAGCAG CGCGCGAAGG CAAGGCCGAG
TACCTGCTGG AGCTGCAACT GACCGGTGCC GATGGCGAGG TGGTGGCAGA GAGTCGCGGC
TTGTATCAGT TGCGACTACG CTGA
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| Protein sequence | MPLPVEIARQ LTEQQIAFVR RSGLQAEVLE PGFVRLCMPL EGNQNHIGSM YAGALFTLAE
IPGGALFLTS FDVQRFYPIV KELNLRFRRP ASGDIRVEAR LSAQEIDDLQ ARAAREGKAE
YLLELQLTGA DGEVVAESRG LYQLRLR
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