| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0554 |
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| Symbol | |
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| ID | 5108178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 597581 |
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| End bp | 598378 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640501767 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001186056 |
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| Protein GI | 146305591 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0000788361 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCAACC ATATCCTTAT CGCCCATGAT CTTCGTGACA CGGCCGACAT GGCTCTGTGC
CGCGCCACCC AACTCGCCCA GCAACACAAC GCCCGCCTGA CTCTGCTGCA CGTGCTCGAT
CCGAGCCAGA GCAGCGAGCA ACACGAAAAG GCACGCCAGG CGCTGGACCG CAGCCTCACC
CAGTTCGCCC CTGCCGGCAC CGAGCTGCGC ATGCTCAGTG GCAAACCCTC CGAAGTGGTC
CTGCAGCAGG TTCAGGACAG CGGCTGTGAT CTGCTGGTGC TGGGCGGCCA TCATCAGCGT
CACGACTTCT TCTCCGGCAC CAGCCTCGAT CGCATCGCCC GGCGCTGCAC CGTGCCGCTG
CTGCTGGTGG CGCGCAACGA CTTCGCCCCC TATCAACGCG CCCTGGCCGC CATCGACTTC
TCCCTGTGCG CCTGCAGCGC CCTCGGCCAG GCCTATCGCT TGCTACCGGA GGGGGCAGAG
CTGCATGCAC TGCATGTGTT CGAACCGGAC AAGGGCACCC CGAAGGAAGT GCAGCTGCAA
TTGCAGACCC AGCAGGGCCT GATCGACCAG CTGCTACAGG ACGAGGCGCA GAACCTGCCG
GAGAAAGGCC CGACACTGAG CCACGAGGTT ATCCAGGGCG GAATCCTGCG CTGCCTGCAG
GAACAGATCA AAGTCCGCCG CAGCGAACTG CTGGTGCTGG GCAGCCACGG CCGCAGCGCG
CTGTCCCAGG CGCTGCTGGG TAGCCTGGCG CAGCATTTTC TGCACAAGGC GCCGTGCGAC
GTGTTCGTGG TGCGTTAG
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| Protein sequence | MFNHILIAHD LRDTADMALC RATQLAQQHN ARLTLLHVLD PSQSSEQHEK ARQALDRSLT
QFAPAGTELR MLSGKPSEVV LQQVQDSGCD LLVLGGHHQR HDFFSGTSLD RIARRCTVPL
LLVARNDFAP YQRALAAIDF SLCACSALGQ AYRLLPEGAE LHALHVFEPD KGTPKEVQLQ
LQTQQGLIDQ LLQDEAQNLP EKGPTLSHEV IQGGILRCLQ EQIKVRRSEL LVLGSHGRSA
LSQALLGSLA QHFLHKAPCD VFVVR
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