| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0547 |
|---|
| Symbol | aroK |
|---|
| ID | 5108171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 585927 |
|---|
| End bp | 586418 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640501760 |
|---|
| Product | shikimate kinase |
|---|
| Protein accession | YP_001186049 |
|---|
| Protein GI | 146305584 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGCTG GAAAGAGCAC CATCGGGCGT CTGCTTGCCA AAGAGCTGCG TTTGCCTTTC
AAGGACTCCG ACAAAGAGAT CGAGCAGCGG ACCGGTGCCG ATATTCCCTG GATCTTCGAT
GTCGAGGGGG AGCAGGGCTT TCGTGAGCGG GAGCAGGCGG TAATCGCCGA GCTGTCGATG
CAGGATGGTC TTGTGTTGGC CACTGGCGGT GGGGCGGTGA TGCGTCCGGA GAATCGCCAG
GCGCTGCATG CTGGAGGTCG CGTGGTGTAT CTGCACACCT CGGTGGAGCA GCAGATAGAC
CGTACCTCAC GTGATCGCAA TCGCCCTCTG CTGCGTACCG CCAATCCCGC GCAAGTGCTG
CGCGATCTCA TGGCGGTGCG TGATCCTCTT TATCGGGAGG TCGCGGATAT CGTCATCGAA
ACGGACGAGC GCCCGCCGCG GATGGTGGTG CAGGAAATTC TCGCGCGTCT GGAAGACTTG
TCGCCCCGTT AA
|
|---|
| Protein sequence | MGAGKSTIGR LLAKELRLPF KDSDKEIEQR TGADIPWIFD VEGEQGFRER EQAVIAELSM
QDGLVLATGG GAVMRPENRQ ALHAGGRVVY LHTSVEQQID RTSRDRNRPL LRTANPAQVL
RDLMAVRDPL YREVADIVIE TDERPPRMVV QEILARLEDL SPR
|
|---|
| |